Pairwise Alignments

Query, 252 a.a., type II secretion system protein N from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., type II secretion system protein N from Sphingobium sp. HT1-2

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 18/177 (10%)

Query: 9   LLFSTVLMTSVVVHLPAQVALSPLPLPE-GLELTGIEGTLWQGQAAQVRWQGMSLGDLNW 67
           ++   + +  ++V +P +VAL    L   GL    I G++W G+  Q+    M +G +  
Sbjct: 12  IILIALFVLGLIVFIPMRVALGLAQLDRLGLAAREIRGSVWSGRIDQLMLGEMPMGSVRA 71

Query: 68  DLHLSALLLGQLEADIRFGRGSSTQLRGKGVVGVGLSGPYADDFLLSLPAAQAITWLPLP 127
            L   +LL+G+   DI   RG    ++G   VG+   G   DD   S+P  +  T+ PLP
Sbjct: 72  GLSPISLLVGRARFDIARHRGQPDDIQGALTVGLDRIG--IDDVTGSVPLGR--TFAPLP 127

Query: 128 VPLMAQGQLEMAVKQYRFGEPYCQQAEGSLAWSAAQLESPIGALQL-----GTVVSD 179
           V     G +   V  Y  G+  C  AEG +    A++ + I  L L     GTV  D
Sbjct: 128 V----SGLMMEDVSGYYRGD-VCGHAEGRV---RARMATQIAGLNLSQGLSGTVACD 176