Pairwise Alignments

Query, 286 a.a., DNA utilization protein GntX from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., putative Competence protein ComF from Pseudomonas putida KT2440

 Score =  128 bits (321), Expect = 1e-34
 Identities = 85/243 (34%), Positives = 123/243 (50%), Gaps = 23/243 (9%)

Query: 54  HWLRKT-TAPLLTPECHLCRLALDTNSPFGV-CSACQAWLEHGYRCARCGLP------TL 105
           HW R      L+   C LC    + + P  + C     WL  G +C  C LP      T 
Sbjct: 6   HWKRLVYKCSLINQMCLLCDEPAEQHYPLCITCEQALPWL--GDQCRHCALPLPMAGLTC 63

Query: 106 TPVDQCGQCLGQPPPWRKLMCVGDYRFPLSDAVHQLKYQRQFWQAPRLAKLLATQINE-- 163
            P   CG+CL   P + +++ +  + FP+   + + K+ RQ+     +A+LL   +    
Sbjct: 64  AP---CGRCL---PAFDQVIALWHFGFPVDTLISRFKHNRQWPLGRLMAELLGQGLQYRY 117

Query: 164 ----PAP-LLCSVPLHWRRRWQRGFNQSDLLARELANMLNVEYDHQLFARRRATPHQQGL 218
               P P LL  VPL  RR  +RGFNQ+ +L R L++ + V  + +L AR R TP QQ L
Sbjct: 118 AEGLPRPDLLLPVPLARRRLRERGFNQAGMLGRWLSSHVGVTCNERLLARTRETPAQQHL 177

Query: 219 SKAQRIHNLRDAFVLNHPPNQPHVAIVDDVVTTGSTIRHLCDLLLDVGVQSIDIYCICRT 278
               R  NLR AF +       HVAIVDDV+TTG+T + +   L   G + +D+YC+ RT
Sbjct: 178 GAKARRRNLRQAFAVQGELEGKHVAIVDDVLTTGATAQAIAQALRKAGARRVDVYCLART 237

Query: 279 PEP 281
           P+P
Sbjct: 238 PKP 240