Pairwise Alignments

Query, 286 a.a., DNA utilization protein GntX from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 96.3 bits (238), Expect = 6e-25
 Identities = 78/239 (32%), Positives = 109/239 (45%), Gaps = 36/239 (15%)

Query: 63  LLTPECHLCRLALDTNSPFGVCSACQAWLEHGY----RCARCGLPTLTPVDQ---CGQCL 115
           LL P C  C  A+D     G+C+AC  W++  +     CA CGLP      +   CG CL
Sbjct: 29  LLPPRCLGCGEAVDRQG--GLCAAC--WVKLTFIAPPLCACCGLPFEYEAQEGVLCGACL 84

Query: 116 GQPPPWRKLMCVGDYR---------FPLSDAVHQLKYQRQFWQAPRLAKLLATQINEPAP 166
             PPP+ +   V  Y          F   D +H  K     W A    +LLA      A 
Sbjct: 85  AAPPPFARARAVLAYDDGSRPLVLGFKHGDRIHAAK-SYGVWLARAGKELLAD-----AD 138

Query: 167 LLCSVPLHWRRRWQRGFNQSDLLARELANMLNVEYDHQLFARRRATPHQQGLSKAQRIHN 226
            L  VPLH  R ++R +NQ+ LLA+ L+    V     L  R R+TP Q GL +  R  N
Sbjct: 139 RLLPVPLHRGRLFRRRYNQAALLAQALSRHSGVPATPDLLQRHRSTPTQGGLDRQGRHRN 198

Query: 227 LRDAFVLNHPPNQ--------PHVAIVDDVVTTGSTIRHLCDLLLDVGVQSIDIYCICR 277
           ++ AF L   P Q          + ++DDV+TTG+T+     +LL  G   +D+  + R
Sbjct: 199 VKGAFRLR--PGQSAKEQVTGQRLVLIDDVMTTGATLAECTRVLLRAGAARVDVLTLAR 255