Pairwise Alignments

Query, 773 a.a., RNA-binding transcriptional accessory protein from Vibrio cholerae E7946 ATCC 55056

Subject, 791 a.a., Tex family protein from Variovorax sp. OAS795

 Score =  793 bits (2048), Expect = 0.0
 Identities = 429/792 (54%), Positives = 550/792 (69%), Gaps = 36/792 (4%)

Query: 5   ICHQIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLAYLRE 64
           I  Q+A E+ V   QV AA+ L+D G TVPFIARYRKEVT GLDD QLR L++RL+YLRE
Sbjct: 4   IIRQLAAEIKVGEHQVKAAIELLDGGATVPFIARYRKEVTDGLDDIQLRELEARLSYLRE 63

Query: 65  MDDRRQTILKSIQEQGKLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEAGLEP 124
           ++DRR  +LKSI EQGKLTP+L  AI  A +K  LEDLYLP+K KRRTKGQIA E G+EP
Sbjct: 64  LEDRRAAVLKSIDEQGKLTPQLRAAIEFAPTKQELEDLYLPFKQKRRTKGQIAREFGIEP 123

Query: 125 LADTLWTQPNTDPESEAAKYINAEKGVADSK---------AALDGARAIVMERIAEDANL 175
           LAD L   P  DP  EA  ++     + D K         A LDG R I+ ER AEDA L
Sbjct: 124 LADKLLADPTLDPAVEAKAFLQPATTLDDGKPGPDFSTVPAVLDGVRDILSERWAEDAAL 183

Query: 176 LEKIRQHLNRNAEIVSRVIEGKEQAGE---KFKDYFDHREPISKAPSHRALAMLRGRNEG 232
           ++++R+ L     + S ++ GK++      KF+DYFD+ EPI + PSHRALA+ RGR   
Sbjct: 184 VQRLREWLWAEGLLKSTLMAGKDENNADVAKFRDYFDYDEPIGRVPSHRALAVFRGRTLE 243

Query: 233 FLT--LTLNADPELEESARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHM 290
            L   L L  +PE     + S  E  IA H G   +   AD   ++ ++W W++K+++  
Sbjct: 244 ILDAKLVLPVEPE---PGKPSIAEGKIALHLGWSHAARPADDLIRKCVAWTWRVKLALST 300

Query: 291 ETELMSAMKERAEIEAIEVFATNLKDLLMAAPAGPRATLGLDPGLRTGCKVAVVDATGKV 350
           E +L + ++E AE  AI+VFA NL+DLL+AAPAGPR  +GLDPG+RTG KVAVVDATGK+
Sbjct: 301 ERDLFTRLREDAEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKL 360

Query: 351 LATDTIYPHAPQHQYDRAMQSIALLVKKFNVDLIAIGNGTASRETDAFAADLIK------ 404
           + T T++PH P+  ++ ++ ++  L  K  V+LIAIGNGTASRETD  AADLIK      
Sbjct: 361 VETATVFPHEPRKDWEGSLHTLGKLCAKHGVNLIAIGNGTASRETDKLAADLIKLLAKMA 420

Query: 405 ----RGNLKVQKIMVSEAGASVYSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKI 460
                  ++V K++VSEAGASVYSASE A++E P++DVSLRGA SIARRLQDPLAELVKI
Sbjct: 421 AQAGAPEMQVDKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELVKI 480

Query: 461 DPKSIGVGQYQHDVSQTLLAKRLDAIVEDCVNAVGVDVNTASAALLTRVAGLSAALAQNI 520
           DPKSIGVGQYQHDV+Q+ LA+ L A+VEDCVN+VGVD+NTAS  LL+RV+GLSA++A+ +
Sbjct: 481 DPKSIGVGQYQHDVNQSELARTLQAVVEDCVNSVGVDLNTASVPLLSRVSGLSASVAKAV 540

Query: 521 VDYRDENGRFESRSALKKVPRLGPKAFEQCAGFLRIMDGKNPLDASAVHPEAYPVVKTIA 580
           V +R+ NG F +R  L  V   GPKAFEQ AGFLRI  G +PLD + VHPE YP+V+ I 
Sbjct: 541 VRWRESNGAFSTRKQLLDVTGFGPKAFEQSAGFLRIRGGADPLDITGVHPETYPLVEQII 600

Query: 581 EKNSKDLKALIGNTEFLRTLRAVDYTDENFGVPTVTDIIKELDKPGRDPRPEFKTATFAE 640
            K  K +  L+G  E L+TL+   + +E FGV TV DI+ EL+KPGRDPRP+FK A F +
Sbjct: 601 VKTGKPIAELMGRAEMLKTLKPELFANEKFGVITVKDILGELEKPGRDPRPDFKVARFND 660

Query: 641 GIHEVSDLEVGMVLEGVVSNVANFGAFVDIGVHQDGLVHISALTDRFISDPREVVKAGDI 700
           G+ ++ DL  GM+LEG VSNVA FGAF+D+GVHQDGLVH+S L+ +F++D REVVK GDI
Sbjct: 661 GVDDIKDLVEGMILEGTVSNVAQFGAFIDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDI 720

Query: 701 VKVKVMEVDVQRKRIALSMRLNDEPGQDN--RSQRSAAPRSGQERRAPRRDEPQGNALGG 758
           VKVKVMEVDV RKRI LSM+L+  P + +  R  R      GQ++ A R + PQ      
Sbjct: 721 VKVKVMEVDVARKRIGLSMKLDAAPARRDGPRDNRFEGASRGQQQGARRDNAPQ------ 774

Query: 759 AMGGAFAAAFAK 770
              G  A+AFAK
Sbjct: 775 -PAGQMASAFAK 785