Pairwise Alignments

Query, 773 a.a., RNA-binding transcriptional accessory protein from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., RNA-binding transcriptional accessory protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  725 bits (1871), Expect = 0.0
 Identities = 401/767 (52%), Positives = 517/767 (67%), Gaps = 26/767 (3%)

Query: 8   QIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLAYLREMDD 67
           +IA EL++  +QV A   L+D+G TVPFI+RYRKE TG LD+ Q+  +  RL  LRE+D 
Sbjct: 10  KIASELSITIKQVEATARLLDEGATVPFISRYRKEATGSLDEVQIAGVRDRLEQLRELDK 69

Query: 68  RRQTILKSIQEQGKLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEAGLEPLAD 127
           RR++ILKSI++Q KLTPELE  I++A++   LED+YLPYKPKRRT+  IA E GLEPLA+
Sbjct: 70  RRESILKSIRDQEKLTPELEAQIMAAETMAALEDIYLPYKPKRRTRATIAREKGLEPLAE 129

Query: 128 TLWTQPNTDPESEAAKYINAEKGVADSKAALDGARAIVMERIAEDANLLEKIRQHLNRNA 187
            L+ Q + D E+EA+ +I+ EK V D   AL GAR I+ E + E+A     IRQ   +  
Sbjct: 130 RLFQQESFDVEAEASNFISEEKEVKDVNEALSGARDIMAEWMNENAEARAAIRQIFEKQG 189

Query: 188 EIVSRVIEGKEQAGEKFKDYFDHREPISKAPSHRALAMLRGRNEGFLTLTLNADPELEES 247
              SRV+ GKE+ G+KFKDYF+  EPI KAPSHR LAM RG  E  L LT   D    E 
Sbjct: 190 VFKSRVMMGKEEEGQKFKDYFEWEEPIEKAPSHRILAMRRGETEMVLMLTAQPD----EE 245

Query: 248 ARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHMETELMSAMKERAEIEAI 307
           A  +  E +  +      S A ++  R       +K  + + METE+  + K+RA+ EAI
Sbjct: 246 AALAKLEDMFVQG-----SNAASEQVRLAARD-CYKRLLKLSMETEVRLSSKKRADEEAI 299

Query: 308 EVFATNLKDLLMAAPAGPRATLGLDPGLRTGCKVAVVDATGKVLATDTIYPHAPQHQYDR 367
            VFA NL+ LL+++P G +  L LDPG RTGCK+ V+D  GK+L  +TIYPH  Q +   
Sbjct: 300 RVFADNLRQLLLSSPLGQKTVLALDPGFRTGCKLVVLDKQGKLLHNETIYPHTGQGKAME 359

Query: 368 AMQSIALLVKKFNVDLIAIGNGTASRETDAFAADLIKRGNLK--VQKIMVSEAGASVYSA 425
           A Q++  LV +F V+ +AIGNGTASRET+AF   L    NL   VQ +MV+E+GAS+YSA
Sbjct: 360 AAQNVKYLVDRFEVEALAIGNGTASRETEAFVKGL----NLPKTVQVVMVNESGASIYSA 415

Query: 426 SELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLAKRLDA 485
           SE+A +EFP+ DV++RGAVSI RRL DPLAELVKIDPKSIGVGQYQHDV Q+ L   LD 
Sbjct: 416 SEVAREEFPDQDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQSALKHSLDD 475

Query: 486 IVEDCVNAVGVDVNTASAALLTRVAGLSAALAQNIVDYRDENGRFESRSALKKVPRLGPK 545
           +V  CVNAVGV+VNTAS  LLT V+GL  ALAQNIV+YR++NG F++R+ LKKV RLG K
Sbjct: 476 VVMSCVNAVGVEVNTASKQLLTYVSGLGPALAQNIVEYRNQNGPFKTRTELKKVARLGDK 535

Query: 546 AFEQCAGFLRIMDGKNPLDASAVHPEAYPVVKTIAEKNSKDLKALIGNTEFLRTLRAVDY 605
           AFEQ AGFLRI D KNPLDASAVHPE+YP+V+ +A+     ++ LI + E  + +   +Y
Sbjct: 536 AFEQAAGFLRIRDAKNPLDASAVHPESYPIVEQMAKDLGVTVQDLIKSDELRKKINLKNY 595

Query: 606 TDENFGVPTVTDIIKELDKPGRDPRPEFKTATFAEGIHEVSDLEVGMVLEGVVSNVANFG 665
             +  G+PT+ DII EL KPGRDPR  F+  +F EG++E+ DL  GM L G+V+N+  FG
Sbjct: 596 VTDTVGLPTLQDIISELAKPGRDPRETFEAFSFTEGVNEIKDLRAGMKLPGIVTNITAFG 655

Query: 666 AFVDIGVHQDGLVHISALTDRFISDPREVVKAGDIVKVKVMEVDVQRKRIALSMRLNDEP 725
           AFVDIGVHQDGLVH+S L+DRF+S+P EVVK G  V+V V+EVD  RKRI+LSM+  D  
Sbjct: 656 AFVDIGVHQDGLVHVSHLSDRFVSNPHEVVKVGQKVEVTVLEVDEARKRISLSMK-GDPA 714

Query: 726 GQDNRSQRSAAPRSGQERRAPRRDEPQGNALGGAMGGAFAAAFAKAK 772
                   S    S +  R  R +EP  +         F A  AK K
Sbjct: 715 AAKPAGGGSRGNNSNKGGRKEREEEPMDD---------FQAKLAKLK 752