Pairwise Alignments

Query, 773 a.a., RNA-binding transcriptional accessory protein from Vibrio cholerae E7946 ATCC 55056

Subject, 750 a.a., Transcriptional accessory protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  697 bits (1800), Expect = 0.0
 Identities = 381/747 (51%), Positives = 502/747 (67%), Gaps = 18/747 (2%)

Query: 8   QIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLAYLREMDD 67
           +IA+ELN+R +QV   + L+D+G TVPFI+RYRKEVTG LD+ Q+  +  R+  LR++D 
Sbjct: 8   KIAEELNIRQKQVSDTIELLDEGATVPFISRYRKEVTGSLDEVQVAAIRDRVQQLRDLDK 67

Query: 68  RRQTILKSIQEQGKLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEAGLEPLAD 127
           RR+ ILKSI+EQ KLTPELE  I  A++   LEDLYLPYKPKRRTK  IA E GLEPLA+
Sbjct: 68  RREAILKSIKEQEKLTPELEGKINDAETMAALEDLYLPYKPKRRTKATIAREKGLEPLAE 127

Query: 128 TLWTQPNTDPESEAAKYINAEKGVADSKAALDGARAIVMERIAEDANLLEKIRQHLNRNA 187
            ++ Q + D E EA  YI+ EK V  ++ AL GAR I+ E + E+A L +K+R       
Sbjct: 128 KIFGQESCDLEEEAKAYIDEEKEVGSTEEALQGARDIIAEWVNENAELRKKMRDLFIEEG 187

Query: 188 EIVSRVIEGKEQAGEKFKDYFDHREPISKAPSHRALAMLRGRNEGFLTLTLNADPELEES 247
           + VS+VI GKE+   K+KDYF+  EPI  APSHR LAM RG  E FL L    D   EE 
Sbjct: 188 KFVSKVIPGKEEEAIKYKDYFEWSEPIKTAPSHRVLAMRRGEKELFLML----DSCPEEL 243

Query: 248 ARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHMETELMSAMKERAEIEAI 307
              +  E +         +Q T+    K  I   +K  +   METE+    K++A+ +AI
Sbjct: 244 DALALMEKMTVT------AQNTSSEQVKLAIKDCYKRLMKPSMETEVRLYTKKKADEDAI 297

Query: 308 EVFATNLKDLLMAAPAGPRATLGLDPGLRTGCKVAVVDATGKVLATDTIYPHAPQHQYDR 367
           +VFA NL+ LL+ AP G ++ + +DPG RTGCK+A +   G+VL  D IYP+ PQ +   
Sbjct: 298 KVFAENLRQLLLGAPLGEKSVMAIDPGFRTGCKLACLGPQGQVLHYDAIYPNEPQRKKAE 357

Query: 368 AMQSIALLVKKFNVDLIAIGNGTASRETDAFAADLIKRGNLKVQKIMVSEAGASVYSASE 427
           +   +  LV+K  V+ IAIGNGTASRET+ F   +    N+ +  +MV+E+GAS+YSASE
Sbjct: 358 SAALVKHLVEKHQVEAIAIGNGTASRETEQFFKSIGLPQNVLI--VMVNESGASIYSASE 415

Query: 428 LAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLAKRLDAIV 487
           +A +EFP+LD+++RGAVSI RRL DPLAELVKIDPKSIGVGQYQHDV Q+ L   LD  V
Sbjct: 416 VAREEFPDLDLTIRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQSALKNSLDDTV 475

Query: 488 EDCVNAVGVDVNTASAALLTRVAGLSAALAQNIVDYRDENGRFESRSALKKVPRLGPKAF 547
             CVN VGV+VNTAS  LLT V+GL  ALAQNIV++R+ENG F+SR  ++KVPRLG KA+
Sbjct: 476 MSCVNGVGVEVNTASKQLLTYVSGLGPALAQNIVNFRNENGPFKSREDIRKVPRLGDKAY 535

Query: 548 EQCAGFLRIMDGKNPLDASAVHPEAYPVVKTIAEKNSKDLKALIGNTEFLRTLRAVDYTD 607
           EQ AGFLRI +  NPLD SAVHPE Y +V+ +A     ++  LI + E    +   +Y  
Sbjct: 536 EQAAGFLRIQNAPNPLDRSAVHPERYDLVQQMATDLGSNVSDLIKDEELRSKVVLKNYVT 595

Query: 608 ENFGVPTVTDIIKELDKPGRDPRPEFKTATFAEGIHEVSDLEVGMVLEGVVSNVANFGAF 667
           E  G+PT+ DI++EL KPGRDPR  F+  +F EG++E+ DL+VGM L G+++N+ NFGAF
Sbjct: 596 ETVGLPTLQDIMEELAKPGRDPRETFEVFSFQEGVNEMKDLKVGMKLPGIITNITNFGAF 655

Query: 668 VDIGVHQDGLVHISALTDRFISDPREVVKAGDIVKVKVMEVDVQRKRIALSMRLNDEPGQ 727
           VD+GVHQDGLVH+S L DR+ISDP EVV     V+V VMEVD+ RKRI LSM+       
Sbjct: 656 VDVGVHQDGLVHLSHLADRYISDPNEVVTVNQKVEVTVMEVDLNRKRIGLSMK------S 709

Query: 728 DNRSQRSAAPRSGQERRAPRRDEPQGN 754
              ++RS     G +R   +  EP+G+
Sbjct: 710 APFAERSKGKSGGAKRERRKEKEPEGD 736