Pairwise Alignments

Query, 773 a.a., RNA-binding transcriptional accessory protein from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., Protein YhgF from Acinetobacter radioresistens SK82

 Score =  730 bits (1885), Expect = 0.0
 Identities = 390/766 (50%), Positives = 535/766 (69%), Gaps = 30/766 (3%)

Query: 5   ICHQIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLAYLRE 64
           +  Q+A EL VRP+QV AA+ LID+G +VPFIARYRKEVT GLDDTQLR LD+RL+YLR+
Sbjct: 4   LVQQLASELAVRPDQVEAAIKLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLSYLRD 63

Query: 65  MDDRRQTILKSIQEQGKLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEAGLEP 124
           +++RR  +++S++EQ KL+ +L   + + ++KN LE++Y PY+PKR +K   A EAGL P
Sbjct: 64  LNERRAKVIESLKEQNKLSDDLLARVEAVETKNALEEIYAPYRPKRTSKSFKAREAGLGP 123

Query: 125 LADTLWTQPNTDPESEAAKYINAEKGVADSKAALDGARAIVMERIAEDANLLEKIRQHLN 184
           +A+ +  +   DP    A + + E    D ++ LD  + I+++  A++  L  +++ +  
Sbjct: 124 VAEKILAE-QVDPSEALAGFSHEE--YPDLESQLDAIQHIIIDEWAQNIALTAELKANFA 180

Query: 185 RNAEIVSRVI-EGKEQAGEKFKDYFDHREPISKAPSHRALAMLRGRNEGFLTLTLNA--D 241
           + A + S V  E K++ G+KF+DYF+  E ++K PSHR LAMLRGR E  L L ++   D
Sbjct: 181 KTAVLKSAVASEEKKEVGKKFRDYFEFSENLNKVPSHRLLAMLRGRQENVLGLKVDGEND 240

Query: 242 PELEESARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHMETELMSAMKER 301
           P ++          +  E+    +   T   + KQ     W  K+   +E  L++  +  
Sbjct: 241 PAIQR---------IEVEYQLDQIQPQTRQDFLKQTAKLFWMGKVRPQVEHSLLTEKRLA 291

Query: 302 AEIEAIEVFATNLKDLLMAAPAGPRATLGLDPGLRTGCKVAVVDATGKVLATDTIYPHAP 361
           AE EA++VFA NL+ LL++APAG R TLG+DPG+RTG K+AVV+ +G VLA  TIYP AP
Sbjct: 292 AENEAMQVFAENLRHLLLSAPAGSRRTLGVDPGIRTGVKLAVVNESGDVLAHSTIYPFAP 351

Query: 362 QHQYDRAMQSIALLVKKFNVDLIAIGNGTASRETDAFAADLIKRG-NLKVQKIMVSEAGA 420
           +   + ++  +A L ++FN++LIAIGNGTASRET+A  A+++    +LK+ ++ VSEAGA
Sbjct: 352 KEDKEGSVAELARLCREFNIELIAIGNGTASRETEAVVAEMMAANPDLKLTRVTVSEAGA 411

Query: 421 SVYSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLA 480
           SVYSASELA++E P LDVS+RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV+Q  LA
Sbjct: 412 SVYSASELASQELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQAGLA 471

Query: 481 KRLDAIVEDCVNAVGVDVNTASAALLTRVAGLSAALAQNIVDYRDENGRFESRSALKKVP 540
           K LDA+VEDCVNAVGVDVNTAS+A+L  +AGL+ A+AQ IV+YR ENGRF++R  LKKVP
Sbjct: 472 KTLDAVVEDCVNAVGVDVNTASSAILGYIAGLNKAIAQQIVEYRKENGRFDNRQDLKKVP 531

Query: 541 RLGPKAFEQCAGFLRIMDGKNPLDASAVHPEAYPVVKTIAEKNSKDLKALIGNTEFLRTL 600
           RLG + FEQ AGFLRI +G  PLDAS+VHPE+Y +V+ I E  +  +K +IGN+E +R +
Sbjct: 532 RLGDRTFEQAAGFLRIQEGNQPLDASSVHPESYGLVEKIVEAKATTVKDIIGNSEIIRQV 591

Query: 601 RAVDYTDENFGVPTVTDIIKELDKPGRDPRPEFKTATFAEGIHEVSDLEVGMVLEGVVSN 660
               + D+ FG+PT+ D++ EL+KPGRDPRPEF+TA F + I +V  L  GM LEGVV+N
Sbjct: 592 DPNQFIDDKFGLPTIQDVLAELEKPGRDPRPEFRTAKFRDDITDVKQLTEGMQLEGVVTN 651

Query: 661 VANFGAFVDIGVHQDGLVHISALTDRFISDPREVVKAGDIVKVKVMEVDVQRKRIALSMR 720
           V NFGAFVDIGVHQDGLVHIS L + F+SDP ++VK G IV+V+V++VD +R R+ LSMR
Sbjct: 652 VTNFGAFVDIGVHQDGLVHISELANEFVSDPHKIVKPGQIVQVRVIQVDAERNRVNLSMR 711

Query: 721 LND-------------EPGQDNRSQRSAAPRSGQERRAPRRDEPQG 753
                           E  Q+ R +R    +  Q  R P+ + PQG
Sbjct: 712 PEGAAAPVKTSPRPRREQNQEQRPERKPQGKRPQHAR-PQGERPQG 756