Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., Transcription elongation factor GreB from Variovorax sp. SCN45

 Score =  116 bits (291), Expect = 2e-31
 Identities = 69/152 (45%), Positives = 93/152 (61%), Gaps = 2/152 (1%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           IT  GY +L+ EL +L  E+RP+I + V WAA  GDRSEN DY Y K+ LR+IDRR+RFL
Sbjct: 33  ITPDGYARLRDELLHLMDEERPKIVETVHWAAKNGDRSENGDYLYGKKRLREIDRRIRFL 92

Query: 66  SKLLPELKIVDYSPQQ-EGKVFFGAWVEIENEAGEVKKFRIVGPEEIYGDAKDYISIDSP 124
           +K L   +I D S      +VFFGA V   +E G+ +   I+G +E    AK  +S  SP
Sbjct: 93  TKRLEIAEITDPSVHHGRDQVFFGATVRYADETGDERSVTILGIDEA-ESAKSQVSWISP 151

Query: 125 MARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           +ARALLK +  +  ++ TP G  E  I S+ Y
Sbjct: 152 IARALLKAREGDVVKLVTPGGAHEVEILSVSY 183