Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., transcription elongation factor GreA from Variovorax sp. OAS795

 Score = 85.5 bits (210), Expect = 4e-22
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 5/159 (3%)

Query: 1   MKTKLITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDR 60
           M T  IT+ G  KL+ EL  L    RP +   +S A + GD SENA+Y   K     I+ 
Sbjct: 1   MATIPITKRGAEKLRAELHQLKTVDRPWVINAISEARAQGDLSENAEYEVAKDRQGFIEG 60

Query: 61  RVRFLSKLLPELKIVDYSP-QQEGKVFFGAWVEI-ENEAGEVKKFRIVGPEEIYGDAK-D 117
           R++ +   L   +I+D +     GKV FG+ VE+ E E GE  K++IVG +E   D K  
Sbjct: 61  RIQEVEGKLSAAQIIDPAELDAGGKVVFGSTVELEEEETGEAVKYQIVGEDE--ADLKLG 118

Query: 118 YISIDSPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
            I+I SP+ARAL+ K+  +  +V  P G+K + I ++ Y
Sbjct: 119 LINISSPIARALIGKEEGDVAEVQAPGGLKRYEIVAVRY 157