Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., Transcription elongation factor GreB from Pseudomonas sp. DMC3

 Score =  157 bits (397), Expect = 8e-44
 Identities = 83/155 (53%), Positives = 110/155 (70%), Gaps = 3/155 (1%)

Query: 3   TKLITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRV 62
           T LIT  G  +++ E   LW  +RP++TQ VS AA+ GDRSENA+YTY K++LR+ID RV
Sbjct: 12  TALITPEGEARMRAEFHELWHVRRPQVTQAVSEAAAQGDRSENAEYTYGKKMLREIDSRV 71

Query: 63  RFLSKLLPELKIVDYSPQQEGKVFFGAWVEIENEAGEVKKFRIVGPEEIYGDAKD-YISI 121
           RFL+K L  LK+V   P    KV+FGAWV IE+E G+  ++RIVGP+E+  D K   ISI
Sbjct: 72  RFLTKRLEALKVVSEKPSDPNKVYFGAWVTIEDEDGKQSRYRIVGPDEL--DLKQGLISI 129

Query: 122 DSPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           DSP+ARAL+ K +D E +V TPTG +  +I +IEY
Sbjct: 130 DSPLARALIGKALDAEVRVQTPTGEQFVYIVAIEY 164