Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., Transcription elongation factor GreA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 79.0 bits (193), Expect = 3e-20
 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 5/154 (3%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           IT+ G  KLK EL  L    RP +   ++ A + GD SENA+Y   K     I+ R+  +
Sbjct: 6   ITKRGAEKLKDELHRLKTVDRPWVINAIAEARAQGDLSENAEYDAAKDRQGFIEGRIAEI 65

Query: 66  SKLLPELKIVDYSP-QQEGKVFFGAWVEIENE-AGEVKKFRIVGPEEIYGDAK-DYISID 122
              L   +++D S     G+V FGA VE+E+E +G    ++IVG +E   D K   ++I 
Sbjct: 66  EGKLSAAQVIDPSALDAGGRVVFGATVELEDEDSGSAVTYQIVGEDE--ADLKLGLVNIS 123

Query: 123 SPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           SP+ARAL+ K+  +  +V  P G K + I ++ Y
Sbjct: 124 SPIARALIGKEEGDVAEVQAPGGTKRFEIVAVRY 157