Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., transcription elongation factor GreB (NCBI) from Escherichia coli BW25113

 Score =  233 bits (594), Expect = 1e-66
 Identities = 113/158 (71%), Positives = 134/158 (84%), Gaps = 1/158 (0%)

Query: 1   MKTKLITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDR 60
           MKT L+TR GY KLKQEL+YLW+E+RPE+T+KV+WAASLGDRSENADY YNK+ LR+IDR
Sbjct: 1   MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR 60

Query: 61  RVRFLSKLLPELKIVDYSPQQEGKVFFGAWVEIENEAGEVKKFRIVGPEEIYGDAKDYIS 120
           RVR+L+K L  LKIVDYSPQQEGKVFFGAWVEIEN+ G   +FRIVG +EI+G  KDYIS
Sbjct: 61  RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFG-RKDYIS 119

Query: 121 IDSPMARALLKKQVDEEFQVHTPTGIKEWFINSIEYEK 158
           IDSPMARALLKK+V +   V+TP G   W++N+IEY K
Sbjct: 120 IDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVK 157