Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., transcription elongation factor GreA from Erwinia tracheiphila SCR3

 Score = 77.0 bits (188), Expect = 1e-19
 Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 5/154 (3%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           +T  G  KL++EL+ L   +RP I   ++ A   GD  ENA+Y   +      + R++ +
Sbjct: 6   MTLRGAEKLREELEELKTIKRPRIIASIAEAREHGDLKENAEYHAAREEQGFCEGRIQEI 65

Query: 66  SKLLPELKIVDYSPQQ-EGKVFFGAWVEIEN-EAGEVKKFRIVGPEEIYGDAK-DYISID 122
              L   +++D +     G++ FG+   + N ++ E   +RIVG +E   D K + IS++
Sbjct: 66  EAKLSNAQVIDVTKMNANGRIIFGSTATVLNLDSEEESTYRIVGDDE--ADFKQNLISVN 123

Query: 123 SPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           SPMAR L+ K+VD+   + TP+G  E+ I ++EY
Sbjct: 124 SPMARGLIGKEVDDITVIKTPSGDVEYEILNVEY 157