Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., transcription elongation facto from Agrobacterium fabrum C58

 Score = 90.5 bits (223), Expect = 1e-23
 Identities = 54/153 (35%), Positives = 91/153 (59%), Gaps = 4/153 (2%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           +T+ G+ KL++EL +  +E+RP I + ++ A + GD SENA+Y   K      + R+  L
Sbjct: 7   MTQGGFVKLQEELRFRQQEERPRIIEAIAEARAHGDLSENAEYHAAKEAQSHNEGRITEL 66

Query: 66  SKLLPELKIVDYSPQQEGKVFFGAWVE-IENEAGEVKKFRIVGPEEIYGDAK-DYISIDS 123
             L    +++D S     K+ FGA V+ I+ ++ E K ++IVG +E   D K   ISI S
Sbjct: 67  EDLTARAEVIDLSKMSGSKIKFGATVKLIDEDSDEEKTYQIVGDQE--ADVKAGRISISS 124

Query: 124 PMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           P+ARAL+ K+V +  +V+ P G K + I ++++
Sbjct: 125 PIARALIGKEVGDSIEVNAPGGAKGYEILAVQW 157