Pairwise Alignments

Query, 161 a.a., transcription elongation factor GreB from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., Transcription elongation factor GreA from Acinetobacter radioresistens SK82

 Score = 79.3 bits (194), Expect = 3e-20
 Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 5/154 (3%)

Query: 6   ITRAGYNKLKQELDYLWKEQRPEITQKVSWAASLGDRSENADYTYNKRLLRQIDRRVRFL 65
           +T  G   L++EL  L   +RP IT  ++ A   GD  ENA+Y   +      + R++ +
Sbjct: 6   MTPEGKTALEKELHQLKTVERPRITAAIAEAREHGDLKENAEYHAAREQQGFCEGRIQDI 65

Query: 66  SKLLPELKIVDYSP-QQEGKVFFGAWVEIEN-EAGEVKKFRIVGPEEIYGDAK-DYISID 122
              L   +++D    +Q G+V FG  V IEN +  E K ++IVG +E   D K + IS++
Sbjct: 66  EGKLGAAQVIDIKDLEQNGRVVFGVTVTIENLDTEEQKTYKIVGDDE--ADFKINKISVN 123

Query: 123 SPMARALLKKQVDEEFQVHTPTGIKEWFINSIEY 156
           SP+AR LL K   +E ++ TP G  E+ I S+EY
Sbjct: 124 SPIARGLLGKSEGDEAKIVTPQGEVEYEIVSVEY 157