Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., DNA-binding response regulator from Sphingobium sp. HT1-2

 Score =  197 bits (501), Expect = 2e-55
 Identities = 107/241 (44%), Positives = 161/241 (66%), Gaps = 6/241 (2%)

Query: 2   VENHKVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGE 61
           ++  ++LVVDDDA +R LL  +L + GF V +VA+G  MD+ L  + F + VLD+M+PGE
Sbjct: 16  MDGSRILVVDDDADIRILLSDFLEQHGFAVTAVADGVAMDQALAAQTFDIAVLDVMMPGE 75

Query: 62  DGLSICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLR 121
           DGLSI RRL  S + +PI+ML+A G +IDRIVGLE+GA+DYLPKP NPRELLAR++ VLR
Sbjct: 76  DGLSILRRLAASGD-LPIIMLSAIGGDIDRIVGLEMGAEDYLPKPCNPRELLARVRTVLR 134

Query: 122 --RQVIEAPGAPSAEETIIEFGEFRLNLGTREMFRGEE-AMPLTSGEFAVLKALVTNARE 178
             R+    P  P+ +   + F  +++++G R +   +   + LT GEF +L+A + + R 
Sbjct: 135 RNRRQTSEPQVPAGQR--LRFAGWQVDMGVRLLTDPDNVVVTLTDGEFRLLRAFIEHPRR 192

Query: 179 PLSRDKLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDGKA 238
            LSRD+L++ + G +  + +R+IDVQ+SRLRR LE        ++T+   GY+F  + + 
Sbjct: 193 VLSRDQLLDYSAGSDAESYDRAIDVQVSRLRRKLERGEMGDELVRTIRNEGYMFTAEVRP 252

Query: 239 A 239
           A
Sbjct: 253 A 253