Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  182 bits (462), Expect = 5e-51
 Identities = 100/228 (43%), Positives = 144/228 (63%), Gaps = 6/228 (2%)

Query: 7   VLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLSI 66
           +L+VDDD  +R LL+ YLS  GFQV + A+G+     L      L++LD+MLP EDG S+
Sbjct: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67

Query: 67  CRRLRNSNNM--IPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQV 124
           CR +R       +PI+MLTA  DE DR++GLE+GADDYL KPF+PREL ARIKA+LRR  
Sbjct: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127

Query: 125 IEAPGAPSAEETIIEFGEFRLNLGTREMF-RGEEAMPLTSGEFAVLKALVTNAREPLSRD 183
               G  +    ++ F ++RL+  +  +F R  E + L+  +FA+LK  + + ++ L RD
Sbjct: 128 F---GQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRD 184

Query: 184 KLMNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYV 231
            + N  RGRE   ++R +D+ +SRLR+ L      PR I+TV G GY+
Sbjct: 185 TIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYL 232