Pairwise Alignments

Query, 240 a.a., two-component system response regulator OmpR from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., Transcriptional regulatory protein OmpR from Pseudomonas sp. DMC3

 Score =  185 bits (469), Expect = 8e-52
 Identities = 105/233 (45%), Positives = 146/233 (62%), Gaps = 3/233 (1%)

Query: 6   KVLVVDDDARLRALLERYLSEQGFQVRSVANGEQMDRLLTRENFHLMVLDLMLPGEDGLS 65
           +VL+V+DD RL  L   YL   G +V    NG      + +E   L++LDLMLPGEDGLS
Sbjct: 7   QVLIVEDDQRLAELTRDYLQANGLRVEIEGNGALAAARIIKEQPDLVILDLMLPGEDGLS 66

Query: 66  ICRRLRNSNNMIPILMLTAKGDEIDRIVGLEVGADDYLPKPFNPRELLARIKAVLRRQVI 125
           ICR++R+  +  PILMLTA+ D+ D+I GL++GADDY+ KP  PR LLARI+A+LRR   
Sbjct: 67  ICRKVRSQYDG-PILMLTARTDDADQIHGLDLGADDYVCKPVRPRLLLARIQALLRRSDT 125

Query: 126 EAPGAPSAEETIIEFGEFRLNLGTREMFRGEEAMPLTSGEFAVLKALVTNAREPLSRDKL 185
             P A  +    ++FG   ++   RE +  +  + LTS EF +L  LV+NA   LSR+++
Sbjct: 126 PEPVAEKSRR--LQFGPLVVDNALREAWLSDNGIELTSAEFDLLWLLVSNAGRILSREEI 183

Query: 186 MNMARGREYSAMERSIDVQISRLRRMLEVDPSKPRYIQTVWGLGYVFVPDGKA 238
               RG  Y   +RSIDV+ISR+R  +  DP  PR I+T+   GY+FVP+  A
Sbjct: 184 FTALRGIGYDGQDRSIDVRISRIRPKIGDDPDHPRLIKTIRSKGYLFVPEACA 236