Pairwise Alignments

Query, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., ATP-dependent DNA helicase RecG from Pseudomonas simiae WCS417

 Score =  776 bits (2003), Expect = 0.0
 Identities = 404/689 (58%), Positives = 501/689 (72%), Gaps = 4/689 (0%)

Query: 5   LSAVPLCELSGVGAKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQ 64
           LS V +  L GVG  +AEKL KVGL  +QD+LFHLPLRY+DRTRV PI QL  G  A ++
Sbjct: 4   LSQVSVTALKGVGEAMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIE 63

Query: 65  GKVMAVDTLFGKRKMLTVKISDGNGTLTLRFFNFTAAMKNNFAEGKFVHAYGEIKRGNQG 124
           G V   D + GKR+ L V++ DG G L+LRF++F+ A K     G  V  YGE + G  G
Sbjct: 64  GTVSGADVVMGKRRSLVVRLQDGTGGLSLRFYHFSNAQKEGLKRGTRVRCYGEARPGASG 123

Query: 125 LEIIHPDYKFFTPAQTPDVEPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQELLPS 184
           LEI HP+Y+  T  + P V+  LTP+YP TEGL Q  LR L  Q L +L   ++ + LP 
Sbjct: 124 LEIYHPEYRAITGDEPPPVDTTLTPIYPLTEGLTQQRLRQLCMQTLTMLGPKSLPDWLPL 183

Query: 185 GLY-DQQM-TLAQALKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRSQG 242
            L  D Q+ +L  A++ +H P AD D+     G H AQ RL  EELL   LS   +R   
Sbjct: 184 ELARDYQLASLDDAIRYLHHPPADADVDELALGHHWAQHRLAFEELLTHQLSQQRLRESM 243

Query: 243 QQDVALPLAPVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGKT 302
           +   A  +    +L  Q LA L F+PT AQQRV  EI  DL++  PM+RL+QGDVG+GKT
Sbjct: 244 RSLRAPAMPKATRLPAQYLANLGFAPTGAQQRVGNEIAYDLSQQEPMLRLIQGDVGAGKT 303

Query: 303 LVAALAAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARETE 362
           +VAALAA++A+E GYQVALMAPTE+LAEQH + F +WLEP+G++V WLAGKLKGK R   
Sbjct: 304 VVAALAALQALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAWLAGKLKGKNRAAA 363

Query: 363 LARIASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYPHQ 422
           L +IA G  +MVVGTHALFQ++V F +LALVIIDEQHRFGV QRL LR+KG      PHQ
Sbjct: 364 LEQIAGG-AQMVVGTHALFQDEVQFKNLALVIIDEQHRFGVQQRLALRQKGVGGRMNPHQ 422

Query: 423 LIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLNEG 482
           LIMTATPIPRTLAM+AYADL+TS++DELPPGRTP+ TV + DT+R E++ER+R AC  EG
Sbjct: 423 LIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVTDTRRVEVIERVRGACA-EG 481

Query: 483 KQAYWVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNNE 542
           +QAYWVCTLI+ESE L  QAA  T E+L   L E+K+GL+HGRMKPAEK AVM  FK   
Sbjct: 482 RQAYWVCTLIEESEELTCQAAETTYEDLTSALGELKVGLIHGRMKPAEKAAVMADFKAGN 541

Query: 543 LHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAPLS 602
           L LLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRG+ ASHCVLL+H PLS
Sbjct: 542 LQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLS 601

Query: 603 KTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLVPQVQR 662
           +  ++RLG++RE+NDGFVIA++DLE+RGPGE+LGT+QTGL  FK+ADL+RD  L+P V+ 
Sbjct: 602 QIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDADLLPAVRD 661

Query: 663 IARHIHERYPQNAQAIIDRWLGERDIYAK 691
            A+ + ER+P +   ++DRWL     Y +
Sbjct: 662 AAQALLERWPDHVSPLLDRWLRHGQQYGQ 690