Pairwise Alignments

Query, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., junction-specific ATP-dependent DNA helicase from Pseudomonas putida KT2440

 Score =  782 bits (2020), Expect = 0.0
 Identities = 410/690 (59%), Positives = 502/690 (72%), Gaps = 5/690 (0%)

Query: 5   LSAVPLCELSGVGAKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQ 64
           LS VP+  L GVG  +AEKL KVGL  +QD+LFHLPLRY+DRTRV PI QL  G  A ++
Sbjct: 4   LSKVPVTVLKGVGEAMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIE 63

Query: 65  GKVMAVDTLFGKRKMLTVKISDGNGTLTLRFFNFTAAMKNNFAEGKFVHAYGEIKRGNQG 124
           G V   D   GKR+ L V++ DG+G LTLRF++F+ A K     G  +  YGE + G  G
Sbjct: 64  GVVSGADVTMGKRRSLVVRLGDGSGVLTLRFYHFSNAQKEGLKRGTHLRCYGEARPGASG 123

Query: 125 LEIIHPDYKFFTPAQTPD-VEPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQELLP 183
           LEI HP+Y+     + P  VE  LTP+YP+TEGL Q  LR L  Q+L LL   ++ + LP
Sbjct: 124 LEIYHPEYRALNGNEPPPPVEQTLTPIYPSTEGLTQQRLRLLCQQSLALLGPRSLPDWLP 183

Query: 184 SGLY-DQQMT-LAQALKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRSQ 241
             L  D Q+  L +A++ +H P AD DL    +G+H AQ RL  EELL   LS   +R  
Sbjct: 184 DELARDYQLAPLDEAIRYLHNPPADADLDELAEGQHWAQHRLAFEELLTHQLSQQRLRES 243

Query: 242 GQQDVALPLAPVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGK 301
            +   A  L    +L+ Q LA L F PT AQQRV  EI  DL++  PMMRLVQGDVG+GK
Sbjct: 244 LRSLRAPVLPRATRLQAQYLANLGFQPTGAQQRVANEIAYDLSQHEPMMRLVQGDVGAGK 303

Query: 302 TLVAALAAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARET 361
           T+VAALAA++A+E GYQVALMAPTE+LAEQH + F +WLEP+GI+V WLAGKLKGKAR  
Sbjct: 304 TVVAALAALQALEAGYQVALMAPTEILAEQHYITFKRWLEPLGIEVAWLAGKLKGKARAA 363

Query: 362 ELARIASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYPH 421
            L +IA+G   MVVGTHALFQE+V F HLAL IIDEQHRFGV QRL LR KG      PH
Sbjct: 364 SLEQIANG-APMVVGTHALFQEEVRFKHLALAIIDEQHRFGVQQRLALRRKGVAGELCPH 422

Query: 422 QLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLNE 481
           QLIMTATPIPRTLAM+AYADL+TSV+DELPPGRTP+ TV + D++R E+VER+R AC  E
Sbjct: 423 QLIMTATPIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRRFEVVERVRAACA-E 481

Query: 482 GKQAYWVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNN 541
           G+QAYWVCTLI+ESE L  QAA  T EEL   L E+K+GL+HGRMKPAEK  +M  FK  
Sbjct: 482 GRQAYWVCTLIEESEELTCQAAESTYEELGSALGELKVGLIHGRMKPAEKAEIMAEFKAG 541

Query: 542 ELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAPL 601
            L LLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRG+  SHCVLL+H PL
Sbjct: 542 NLQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPL 601

Query: 602 SKTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLVPQVQ 661
           S+  ++RLG++RE+NDGF+IA++DLE+RGPGE+LGT+QTGL  FK+ADL+RD  L+P V+
Sbjct: 602 SQIGRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDADLLPAVR 661

Query: 662 RIARHIHERYPQNAQAIIDRWLGERDIYAK 691
             A+ +  R+P++   ++DRWL     Y +
Sbjct: 662 DAAQALVSRWPEHVSPLLDRWLRHGQQYGQ 691