Pairwise Alignments

Query, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., ATP-dependent DNA helicase RecG (EC 3.6.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  570 bits (1470), Expect = e-167
 Identities = 341/695 (49%), Positives = 425/695 (61%), Gaps = 40/695 (5%)

Query: 24  LEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQGKVMAVDTLFGKRKMLTVK 83
           L K+GL    DL  HLPLRYED TR+  +     G  A ++G V   +  F  R+ L V 
Sbjct: 18  LHKLGLVRDIDLALHLPLRYEDETRIVSLRGARDGQLAQIEGTVTHSEISFRPRRQLLVT 77

Query: 84  ISDGNGTLTLRFFNFTAAMKNNFAEGKFVHAYGEIKRGNQGLEIIHPDYKFFTPAQTPDV 143
           + DG  T TLRFF F  A +   A G  V   GE++ G  G  ++HP +      + PD 
Sbjct: 78  LDDGTDTCTLRFFTFYPAHQKTLAVGARVRVRGELRGGFAGWSMVHPAFHL-AGGELPDA 136

Query: 144 EPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQELLPSGLYDQQM-------TLAQA 196
              LTPVYPT+  L Q  +R      L   +++ + E LP  L            TL  A
Sbjct: 137 ---LTPVYPTSAQLPQAYIRKAAAGGL---KRADLSETLPPALLGGLQAVVRGTWTLRDA 190

Query: 197 LKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRSQGQQDVALPLAPVHQ- 255
           L+ +H P  D+ L   E   HPA  RL  EELLAQ LS    +    Q+ A   APV + 
Sbjct: 191 LQYLHHPGPDVSLDALEDRSHPAWQRLKAEELLAQQLSQFTAK----QERAALRAPVLRA 246

Query: 256 ----LKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGKTLVAALAAVR 311
               L +QLL  LPF+ T AQ+RV  EI  DL +  PM RL+QGDVGSGKT+VAALAA  
Sbjct: 247 APGGLHEQLLGALPFALTGAQRRVGEEIARDLLRQVPMHRLLQGDVGSGKTVVAALAAAI 306

Query: 312 AIEHGYQVALMAPTELLAEQHALNFAQWLEPM----GIQVGWLAGKLKGKARETELARIA 367
           AI+ G+Q ALMAPTE+LAEQH      WLEP+    G +V WL G  K K R   L  IA
Sbjct: 307 AIDAGWQCALMAPTEILAEQHFAKLIGWLEPLLAPLGKRVAWLTGSQKKKQRGEMLVLIA 366

Query: 368 SGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREK------GAKQGAYPH 421
           SGE  +VVGTHA+ Q+QV F HLAL IIDEQHRFGV QRL LR K      G +Q   PH
Sbjct: 367 SGEAALVVGTHAVIQDQVVFKHLALAIIDEQHRFGVAQRLALRSKVGVAADGTEQE--PH 424

Query: 422 QLIMTATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLNE 481
            L+MTATPIPRTLAM+ YADL+ S IDELPPGRTPI T  + D++R E++ERIR   L +
Sbjct: 425 LLMMTATPIPRTLAMSYYADLDVSTIDELPPGRTPIVTKVVADSRRAEVIERIRGQ-LAQ 483

Query: 482 GKQAYWVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNN 541
           G+Q YWVC LI+ESE ++   A  T  EL   LP V +GL+H RM  AEK+AVM  F   
Sbjct: 484 GRQVYWVCPLIEESEAIDLSNATATHAELSASLPGVLVGLLHSRMPVAEKKAVMSLFTGG 543

Query: 542 ELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAP- 600
           ++ +LV+TTVIEVGVDVPNASLM+IE+ ER GL+QLHQLRGRVGRG  AS CVL++  P 
Sbjct: 544 QMGVLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLMYTPPD 603

Query: 601 ---LSKTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLV 657
              L +TA++RL  + +++DGF IA+RDLEIRGPGE LG +Q+G    + ADL  D  L+
Sbjct: 604 GGRLGETARERLRAMADTSDGFEIARRDLEIRGPGEFLGARQSGAPLLRFADLATDGHLL 663

Query: 658 PQVQRIARHIHERYPQNAQAIIDRWLGERDIYAKA 692
              +  A  +  +YP  A+  I RWLG +  Y KA
Sbjct: 664 DWAREAAPVMLAQYPAAAEKHIARWLGGKAEYLKA 698