Pairwise Alignments

Query, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., ATP-dependent DNA helicase RecG from Azospirillum sp. SherDot2

 Score =  474 bits (1221), Expect = e-138
 Identities = 297/691 (42%), Positives = 409/691 (59%), Gaps = 22/691 (3%)

Query: 9   PLCELSGVGAKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQGKVM 68
           P+  L G+G ++ + +EK+    V DLL+HLP    DR     I Q  HG  A +  ++ 
Sbjct: 34  PVTALPGLGPRLGKLVEKLAGAHVVDLLWHLPCGVVDRRFSPKIAQAPHGRIATLTVRID 93

Query: 69  AVDTLFGKRKMLTVKISDGNGTLTLRFFNFTAA-MKNNFAEGKFVHAYGEIKRGNQGLEI 127
           +       R    ++ +D  G L L +F+     +      G  +   G+++  N   +I
Sbjct: 94  SHAPPVNPRHPYKIRCTDETGVLELVYFHIRGDWLSKQIPAGTTMVISGKVEWFNDTAQI 153

Query: 128 IHPDYKFFTPAQTPDVEPNLTPVYPTTEGLRQLTLRNLTDQALVLLEKSAVQELL-PSGL 186
            HPD     P    +    + PVYP T GL   TLR     AL   +   + E   P+ L
Sbjct: 154 THPDA--VVPVDAKEDLELVEPVYPMTAGLPAKTLRKAVRAALN--DVPPLDEWQDPAWL 209

Query: 187 YDQQM-TLAQALKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRSQGQQD 245
             +Q  T A+ALK  H P  + DL        P + RL  +ELLA  L+++ +R+  ++ 
Sbjct: 210 SRRQWPTWAEALKRAHTPEDEGDLA----ATAPIRCRLAYDELLANQLALMLVRASQRRL 265

Query: 246 VALPLAPVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGKTLVA 305
                     L++  LA LPFS T +Q   + EI AD+A    M+RL+QGDVGSGKT+VA
Sbjct: 266 AGRATQGDGSLRRAALAALPFSLTGSQAGSLEEIYADMAAERRMLRLLQGDVGSGKTVVA 325

Query: 306 ALAAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARETELAR 365
            +A + A+E G Q ALMAPTE+LA QHA + A      G+++G L G+ KGKAR+  L R
Sbjct: 326 LMAMLNAVETGAQAALMAPTEILARQHAESLAPLCRAAGVEIGLLTGRDKGKARQAVLDR 385

Query: 366 IASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYPHQLIM 425
           +ASGE+ ++VGTHALFQE V+F  LAL +IDEQHRFGVHQRL+L  KG         L+M
Sbjct: 386 LASGELPLLVGTHALFQEDVAFKDLALAVIDEQHRFGVHQRLQLSAKGRAVDV----LVM 441

Query: 426 TATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLNEGKQA 485
           TATPIPRTL +TAY D++ S + E P GR P+QTV I   + +E+V  I+   + EG + 
Sbjct: 442 TATPIPRTLTLTAYGDMDVSRLTEKPAGRKPVQTVTIALDRLEEVVNGIQRK-VTEGARV 500

Query: 486 YWVCTLIDESEVLEAQAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNNELHL 545
           YWVC L+DESE  +  AA E    L+    + ++GLVHG+M+  +K AVM AF    L +
Sbjct: 501 YWVCPLVDESEQSDLAAATERHAFLRATFGD-RVGLVHGKMRGPDKDAVMAAFAEGSLDV 559

Query: 546 LVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAPLSKTA 605
           LVATTVIEVGV+VP A++M+IE+ ER GLAQLHQLRGRVGRG   S C+L+F + L++TA
Sbjct: 560 LVATTVIEVGVNVPEATVMVIEHAERFGLAQLHQLRGRVGRGEKPSSCLLMFESNLTETA 619

Query: 606 QKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLVPQVQRIAR 665
           + RL  LR++ DGFVIA+ DL +RG GE+LGT+Q+GL  F++ADL     L+   +  AR
Sbjct: 620 RARLKTLRDTEDGFVIAEEDLRLRGAGEVLGTRQSGLPGFRMADLAVHGDLLAVARDDAR 679

Query: 666 HIHERYPQNA----QAIID-RWLGERDIYAK 691
            + ER P  A    QA+    +L ERD  AK
Sbjct: 680 LVVERDPDLASPRGQALRTLLYLFERDAAAK 710