Pairwise Alignments

Query, 705 a.a., bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

 Score =  425 bits (1092), Expect = e-123
 Identities = 242/720 (33%), Positives = 407/720 (56%), Gaps = 45/720 (6%)

Query: 21  EALRQSYVVARDAHEGQTRSS-----GEPYIIHPVAVARILAEMRLDLETLQAALLHDVI 75
           EAL+ +   AR++ +    S      G       + +A ILA+++LD ++L AA+L+  +
Sbjct: 35  EALKAACEFARESEQQDNASKNLWAEGTSSFRTGLEIAEILADLKLDQDSLIAAVLYRGV 94

Query: 76  EDCDVTKEDLDAHFGSSVAELVDGVSKLDKLK--FRDRK------EAQAENFRKMVLAMV 127
            +  +    +   FGS VA+L+DGV ++  +      R+      + Q EN RKM++AMV
Sbjct: 95  REGHIQLATVGQRFGSVVAKLIDGVLRMAAISASLSPRQSMVLGTQGQVENLRKMLVAMV 154

Query: 128 QDIRVILIKLADRTHNMRTLGALRPDKKRRIARETLEIYAPLAHRLGIHNIKTELEELGF 187
            D+RV LIKLA+RT  +R +     +K+ R+ARE  +IYAPLAHRLGI +IK ELE+L F
Sbjct: 155 DDVRVALIKLAERTCAIRAVKTADDEKRNRVAREVFDIYAPLAHRLGIGHIKWELEDLSF 214

Query: 188 EALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLQEVGLPARVVGREKNLFSIYNKM 247
             L P++Y+ +  ++   R +R+  I  + +++   LQ  G+ A + GR K+++SI+ KM
Sbjct: 215 RYLEPDQYKQIATLLHERRLDRERFITDVMNQLRSELQATGVEADISGRAKHIYSIWRKM 274

Query: 248 KTKEQRFHTIMDIYAFRIVVDTADTCYRVLGQVHSLYKPRPARMKDYIAVPKANGYQSLH 307
           + K   F  I D+ A R++V     CY  LG VH+L++  P    DYIA PK NGY+SLH
Sbjct: 275 QRKGLAFSQIYDVRAVRVLVPEMRDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLH 334

Query: 308 TSMVGPHGVPVEVQIRTEDMDQMADKGVAAHWSYKANSERGGTTAQIKAQRWMQSLLELQ 367
           T+++GP G  +EVQIRT  M + A+ GV AHW YK    + G+    +   W++ +LE  
Sbjct: 335 TAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRYKGTDVKAGSNQYEEKISWLRQVLEWH 394

Query: 368 QSAGNSFEFIENVKSDLFPDEIYVFTPKGRIVELPMGATAVDFAYAVHTDIGNTCVGARV 427
           +  G+     E ++ D+ PD +Y+FTP G  ++LP GAT +DFAY VHT+IG+ C GA++
Sbjct: 395 EELGDIGGLAEQLRVDIEPDRVYIFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKI 454

Query: 428 DRTPYPLSQSLKSGQTVEIISAPGARPNAAWLN----YVVTSRARTKIRQVLKTMRREDS 483
           +    PL+ SL++G+ VEII++    P+  WLN    Y+ TSRAR KI    K   R+ +
Sbjct: 455 NGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNPNLGYITTSRARAKIVHWFKLQARDQN 514

Query: 484 ITLGRRLLNHALGEHSVNEIAPENISKVLSDLKIASMDDLLAAIGLGELMSIVIARRLLG 543
           +  G+ LL   LG   + ++  + +++  +++KIA  +D+ AA+G G+L       +L+ 
Sbjct: 515 VAAGKTLLERELGRLGLPQVDFDKLAE-KANMKIA--EDMFAALGAGDLR----LAQLVN 567

Query: 544 NADELTEPSKSG---------------GNKNKLPIRGAEGILLTFANCCHPIPDDHIIAH 588
            A +L EP +                 G +  + I+G   ++   A CC P+P D I+ +
Sbjct: 568 LAQQLVEPERGSEQLELIPRKATGYKPGKRGDIQIQGVGNLMTQIAGCCQPLPGDAIVGY 627

Query: 589 VSPGRGLVVHRETCPNVRGY-QKEPDKYMAVEWTKDYDQEFITELKVDMHNRQGALAELT 647
           ++ GRG+ +HR+ C +V     +EP++ + V W       +  ++ +  ++R G L +++
Sbjct: 628 ITQGRGVSIHRQDCASVLQLGGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVS 687

Query: 648 NVISKTGSNIHGLST---EERDGRLYTVTVLLTTKDRVHLAGIMRKIRTMPHALKVRRRK 704
            V+     N+  ++T   +E +  L ++T+ +   D   L  ++ +I  +P+ ++ RR +
Sbjct: 688 QVLLNERINVLAVNTRSNKEDNTALMSLTIEIPGLDA--LGRLLGRISQLPNIIETRRNR 745