Pairwise Alignments

Query, 705 a.a., bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 743 a.a., (p)ppGpp synthetase, RelA/SpoT family from Enterobacter asburiae PDN3

 Score =  392 bits (1008), Expect = e-113
 Identities = 228/685 (33%), Positives = 369/685 (53%), Gaps = 37/685 (5%)

Query: 50  VAVARILAEMRLDLETLQAALLHDVIEDCDVTKED-LDAHFGSSVAELVDGVSKLDKLKF 108
           V +  IL+ + +D+ETLQAALL   + D DV  ED L    G SV EL+ GV   D    
Sbjct: 60  VEMVEILSMLNMDIETLQAALLFP-LADADVVSEDVLRDSVGKSVVELIHGVR--DMAAI 116

Query: 109 RDRKEA--------QAENFRKMVLAMVQDIRVILIKLADRTHNMRTLGALRPDKKRRIAR 160
           R  K A        Q +N R+M+LAMV D R ++IKLA+R  ++R +     D++   A+
Sbjct: 117 RQLKAAHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAK 176

Query: 161 ETLEIYAPLAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEI 220
           E   IYAPLA+RLGI  +K ELE+  F  L+P  Y+ + +++   R +R+  I+     +
Sbjct: 177 ECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVGGL 236

Query: 221 EGRLQEVGLPARVVGREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTADTCYRVLGQV 280
              ++E  + A V GR K+++SI+ KM+ K   F  + D+ A RIV +    CY  LG V
Sbjct: 237 RQAMKEENVRAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIV 296

Query: 281 HSLYKPRPARMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAHWS 340
           H+ ++  P    DY+A PK NGYQS+HT ++GP G  VE+QIRT+ M + A+ GVAAHW 
Sbjct: 297 HTHFRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWK 356

Query: 341 YKANSERGGTTAQIKAQRWMQSLLELQQSAGNSFEFIENVKSDLFPDEIYVFTPKGRIVE 400
           YK  +  G  +       W++ L+  Q+   +S E ++ V+S +F D +YVFTPKG +V+
Sbjct: 357 YKEGTSGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVD 416

Query: 401 LPMGATAVDFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSGQTVEIISAPGARPNAAWLN 460
           LP G+T +DFAY +H+D+G+ C+GA++     P +  L+ G  +EII+     P+  WLN
Sbjct: 417 LPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLN 476

Query: 461 ----YVVTSRARTKIRQVLKTMRREDSITLGRRLLNHALGEHSVNEIAPENISKVLSDLK 516
               YV TSR R+KI    +   R+ +I  GR++L+  L    ++    E    +L    
Sbjct: 477 PNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHIGISLKEAEKF--LLPRYN 534

Query: 517 IASMDDLLAAIG-----LGELMSIVIARRLLGNADE------------LTEPSKSGGNKN 559
              +D+LLAAIG     L ++++ + A+    +A E               P +   +  
Sbjct: 535 FNELDELLAAIGGGDIRLNQMVNFLQAQFNKPSAAEQDAAALKQLQQKTYAPQQRSKDNG 594

Query: 560 KLPIRGAEGILLTFANCCHPIPDDHIIAHVSPGRGLVVHRETCPNVRGYQKE-PDKYMAV 618
           ++ + G   ++   A CC PIP D I+  ++ GRG+ +HR  C  +   Q   P++ +  
Sbjct: 595 RVVVEGVGNLMHHIARCCQPIPGDDIVGFITQGRGISIHRSDCDQLAELQSHAPERIVEA 654

Query: 619 EWTKDYDQEFITELKVDMHNRQGALAELTNVISKTGSNIHGL-STEERDGRLYTVTVLLT 677
            W + Y   +   ++V  ++R G L ++T +++    N+ G+ S  +   +L T+ + + 
Sbjct: 655 VWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDTREQLATIDMTIE 714

Query: 678 TKDRVHLAGIMRKIRTMPHALKVRR 702
             +   L  ++ K+  +P  +  RR
Sbjct: 715 IYNLQVLGRVLGKLNQVPDVIDARR 739