Pairwise Alignments

Query, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

Subject, 129 a.a., DNA-directed RNA polymerase subunit omega from Xanthobacter sp. DMC5

 Score = 63.9 bits (154), Expect = 5e-16
 Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60
          MARVTV+D ++K+ NRF+LVL+AA RAR M S G+   +  +NDK  V+ALREI +  ++
Sbjct: 1  MARVTVEDCIDKVDNRFELVLLAAHRAR-MISSGQQITIDRDNDKNPVVALREIADETVS 59

Query: 61 -----KDVLDARERQ---EQQEQEAAELAAVS 84
               +D++ + ++    ++ E EA  L A S
Sbjct: 60 PEDLKEDLIHSLQKYTEVDEPEPEAVPLIASS 91