Pairwise Alignments

Query, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

Subject, 87 a.a., DNA-directed RNA polymerase subunit omega from Pseudomonas simiae WCS417

 Score = 82.4 bits (202), Expect = 1e-21
 Identities = 41/78 (52%), Positives = 58/78 (74%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60
          MARVTV+D +E + NRF+LV+++ +RARQ+ +GGK+ LV  ENDKPTV+ALREI EGL++
Sbjct: 1  MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPLVQWENDKPTVVALREIAEGLMS 60

Query: 61 KDVLDARERQEQQEQEAA 78
           + +   E  E +   AA
Sbjct: 61 YEFIANAEIVEDEPLFAA 78