Pairwise Alignments

Query, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

Subject, 67 a.a., DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 55.5 bits (132), Expect = 1e-13
 Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60
          MAR+TV+D +E+I NRF LVL A  RAR +  G    +  E  +KP V ALREI +G + 
Sbjct: 1  MARITVEDCLEQIPNRFQLVLAATYRARMLSQGHAPKI--ESKNKPGVTALREIADGKVG 58

Query: 61 KDVL 64
           ++L
Sbjct: 59 LEML 62