Pairwise Alignments

Query, 90 a.a., DNA-directed RNA polymerase subunit omega from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., DNA-directed RNA polymerase subunit omega from Azospirillum sp. SherDot2

 Score = 60.8 bits (146), Expect = 5e-15
 Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 9/90 (10%)

Query: 1  MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT 60
          MARVTV+D V K+ NRF+LV++AA+RAR++ SG     +  +NDK  V+ALREI +  ++
Sbjct: 1  MARVTVEDCVLKVPNRFELVMMAAQRAREVASGA-PLSIDRDNDKNPVVALREIADETVS 59

Query: 61 KDVL--------DARERQEQQEQEAAELAA 82
           + L              ++ E+E  EL A
Sbjct: 60 LEYLKNALIKGHQKHVEPDEPEEEIVELMA 89