Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., proline:sodium symporter PutP from Pseudomonas simiae WCS417

 Score = 89.0 bits (219), Expect = 4e-22
 Identities = 116/549 (21%), Positives = 208/549 (37%), Gaps = 98/549 (17%)

Query: 13  ITFALYI------GIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGII 66
           ITF +YI      G   +    + S++ + G  +  V   ++  A  MS    + + G I
Sbjct: 9   ITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAI 68

Query: 67  SFIGYDGTVYLMGWTGGYVLLALCLAPYLR-----KFGKFTVPDFIGDRYYSRTARMVAV 121
              G   +   +G   G  L  L +A  LR          T+PD+   R+  ++  +  +
Sbjct: 69  YMSGLSESWIAIGLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRII 128

Query: 122 FCAIFISF--TYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGITYTQV 179
              + + F   Y A  +     +F     +     +  G A    Y  +GG   +++T  
Sbjct: 129 SAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAVSWTDT 188

Query: 180 AQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGFTAYTD 239
            Q  ++IFA ++  I   L+ TG      G  +T              LA+E       D
Sbjct: 189 VQATLMIFALILTPIIV-LLATG------GVDTTF-------------LAIEAKDPTNFD 228

Query: 240 GSKSMVDVFFICAALM---VGTAGLPHVIIRFFTVPKVSDA----RVSAGWALVFIAFLY 292
             K+   +  I  +LM   +G  G PH++ RF     V       R+S  W ++ +    
Sbjct: 229 MLKNTTFIGII--SLMGWGLGYFGQPHILARFMAADSVKSIAKARRISMTWMILCLGG-- 284

Query: 293 TTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGD 352
           T A      A  +    + GP                                       
Sbjct: 285 TVAVGFFGIAYFSAHPEVAGP--------------------------------------- 305

Query: 353 ARNEMTINNDIIVLASPEIAKL--PNWVVALLAAGGLAAALSTAAGLLLVISTAISHDLL 410
               +  N++ + +   E+AKL    W+  +L +  LAA +ST +  LLV S+A++ D  
Sbjct: 306 ----VNENHERVFI---ELAKLLFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFY 358

Query: 411 KKGFKPDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPAIIL 470
           K   + + +  + +   R+   L  + A  +  NP   V  +V++A+    A+F P +++
Sbjct: 359 KTFLRKNASQVELVWVGRLMVLLVALIAIAMAANPENRVLGLVSYAWAGFGAAFGPVVLI 418

Query: 471 GIFYKKMNKEGAIIGMLAGITFTAAYIIYFKFINPAASVPANWW-----FGISPEGIGTL 525
            + +K M + GA+ G+L G   T     +F+ +     +P   +     + +S  G  T 
Sbjct: 419 SVIWKGMTRNGALAGILVG-AITVIVWKHFELLGLYEIIPGFIFASLAIYFVSKLGAPTA 477

Query: 526 GMCLNFVVA 534
           GM   F  A
Sbjct: 478 GMVERFDAA 486