Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., sodium-solute symporter, putative from Variovorax sp. SCN45

 Score = 85.1 bits (209), Expect = 6e-21
 Identities = 112/497 (22%), Positives = 193/497 (38%), Gaps = 85/497 (17%)

Query: 7   TFILVGITFALYIGIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGII 66
           T ++V +   + IG+    R  +T++F +AG  +        T A W  + + + +    
Sbjct: 4   TLVIVYLLVTIAIGLYAAKRVKNTTDFAIAGRHLPLFMIVTTTFATWFGSETVLGIPAKF 63

Query: 67  SFIGYDGTVYLMGWTGG-YVLLALCLAPYLRKFGKFTVPDFIGDRYYSRTARMVAVFCAI 125
              G +G V      G   +L+ L  A  L +    T+ D+  +RY     R V V C++
Sbjct: 64  IEGGLNGVVEDPFGAGTCLILVGLFFAGKLYRMTLLTISDYYRERY----GRTVEVACSL 119

Query: 126 FISFTY---VAGQMRGVGVVFARFLE--VDINVGIVIGMAIVFFYAVMGGMKGITYTQVA 180
            I  +Y   V+ Q+  +G+VF       + I +G+VIG+  +  Y + GGM  +  T   
Sbjct: 120 IIMLSYLGWVSAQVTALGLVFNLLSAGVISIPMGMVIGVISILAYTLFGGMWSVAVTDFI 179

Query: 181 QYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGFTAYTDG 240
           Q  +L+    V A+F               GS   G D     K+   AV      +   
Sbjct: 180 QMIILVAGLAVIAMFA--------------GSMAGGAD-----KVVAFAVSKDLFKFWPE 220

Query: 241 SKSMVDVFFICAA--LMVGTAGLPHVIIRFFTVPKVSDAR---VSAGWALVFIAFLYTTA 295
                 VFF  AA  +M+G+     V  R  +   V  A    V  G A +  AF+    
Sbjct: 221 PSWHDMVFFFAAAITMMLGSIPQQDVFQRVMSANSVKAATRGPVIGGLAYILFAFVPMFL 280

Query: 296 PAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRMFYSGDARN 355
            A A         T+   D Q                                       
Sbjct: 281 VASALLIMPEQTATLLKEDPQK-------------------------------------- 302

Query: 356 EMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAAL-STAAGLLLVISTAISHDLLKKGF 414
                    VL +  + K+P +V+ +L  G L +A+ STA+  LL  S   + ++ ++ F
Sbjct: 303 ---------VLPTLVLQKMP-FVMQVLFFGALLSAIKSTASATLLAPSVTFTENIWRQ-F 351

Query: 415 KPDMTDKQELLAARIAAALAIVGAGYLGINPPGF-VAQVVAFAFGLAAASFFPAIILGIF 473
           +P  TD+Q L+  RI   L         I   G  + ++V+ A+ +     F  ++ G++
Sbjct: 352 RPAGTDRQNLMTMRITVLLFSAAVLAYAIRMQGTPIYELVSGAYQVPLVGAFVPLVCGLY 411

Query: 474 YKKMNKEGAIIGMLAGI 490
           +++   +GA+  ++ GI
Sbjct: 412 WRRATTQGAVASIVLGI 428