Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., sodium/L-proline transporter from Pseudomonas putida KT2440

 Score = 94.7 bits (234), Expect = 8e-24
 Identities = 112/502 (22%), Positives = 193/502 (38%), Gaps = 98/502 (19%)

Query: 13  ITFALYI------GIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGII 66
           ITF +YI      G A +    + S++ + G  +  V   ++  A  MS    + + G I
Sbjct: 57  ITFVIYIAAMVLIGFAAYRATNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAI 116

Query: 67  SFIGYDGTVYLMGWTGGYVLLALCLAPYLR-----KFGKFTVPDFIGDRYYSRT------ 115
            F G       +G T G  L  L +A  LR          T+PD+   R+   +      
Sbjct: 117 YFAGLSEAWIAIGLTVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDNSGLLRII 176

Query: 116 -ARMVAVFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGI 174
            A ++ VF  I+ +   VAG       +F     +     +  G A    Y  +GG   +
Sbjct: 177 SAIVILVFFTIYCASGIVAGAR-----LFESTFGMSYETALWAGAAATIAYTFVGGFLAV 231

Query: 175 TYTQVAQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGF 234
           ++T   Q  ++IFA ++  +   L+ TG      GF  T               A+E   
Sbjct: 232 SWTDTVQASLMIFALILTPVIV-LISTG------GFDQTFA-------------AIEAVN 271

Query: 235 TAYTDGSKSMVDVFFICAALM---VGTAGLPHVIIRFFTVPKVSD----ARVSAGWALVF 287
            A  D  K    +  I  +LM   +G  G PH++ RF     V       R+S  W ++ 
Sbjct: 272 PANFDMLKGATFIGII--SLMGWGLGYFGQPHILARFMAADSVKSIAKARRISMTWMILC 329

Query: 288 IAFLYTTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRM 347
           +A   T A      A  +    + GP                                  
Sbjct: 330 LA--GTCAVGFFGIAYFSAHPELAGP---------------------------------- 353

Query: 348 FYSGDARNEMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISH 407
                    ++ N++ + +   +I   P WV  +L +  LAA +ST +  LLV S+A++ 
Sbjct: 354 ---------VSENHERVFIELAKILFNP-WVAGVLLSAILAAVMSTLSCQLLVCSSALTE 403

Query: 408 DLLKKGFKPDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPA 467
           D  K   + + +  + +   R+      + A  +  NP   V  +VA+A+    A+F P 
Sbjct: 404 DFYKAFLRKNASQVELVWVGRLMVLAVALIAIAMAANPENRVLGLVAYAWAGFGAAFGPV 463

Query: 468 IILGIFYKKMNKEGAIIGMLAG 489
           +++ + +K M + GA+ G++ G
Sbjct: 464 VLISVLWKGMTRNGALAGIVVG 485