Pairwise Alignments

Query, 567 a.a., cation acetate symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Sodium/proline symporter from Pseudomonas sp. DMC3

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 120/552 (21%), Positives = 208/552 (37%), Gaps = 104/552 (18%)

Query: 13  ITFALYI------GIAIWARAGSTSEFYVAGGGVHPVANGMATAADWMSAASFISMAGII 66
           ITF +YI      G+  +    + S++ + G  +  V   ++  A  MS    + + G I
Sbjct: 9   ITFVIYIAAMVLIGLMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAI 68

Query: 67  SFIGYDGTVYLMGWTGGYVLLALCLAPYLR-----KFGKFTVPDFIGDRYYSRT------ 115
              G   +   +G   G  L  L +A  LR          T+PD+   R+  ++      
Sbjct: 69  YMSGLSESWIAIGLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRII 128

Query: 116 -ARMVAVFCAIFISFTYVAGQMRGVGVVFARFLEVDINVGIVIGMAIVFFYAVMGGMKGI 174
            A ++ VF  I+ +   VAG       +F     +     +  G A    Y  +GG   +
Sbjct: 129 SAIVILVFFTIYCASGIVAGAR-----LFESTFGMTYETALWAGAAATIAYTFIGGFLAV 183

Query: 175 TYTQVAQYCVLIFAFLVPAIFTSLMMTGNPIPQIGFGSTLTGTDDYLLNKLDGLAVELGF 234
           ++T   Q  ++IFA ++  I   L+ TG      G  +T              LA+E   
Sbjct: 184 SWTDTVQATLMIFALILTPIIV-LLATG------GVDTTF-------------LAIEAQD 223

Query: 235 TAYTDGSKSMVDVFFICAALM---VGTAGLPHVIIRFFTVPKVSDA----RVSAGWALVF 287
            +  D  K    +  I  +LM   +G  G PH++ RF     V       R+S  W ++ 
Sbjct: 224 PSNFDMLKGTTFIGII--SLMGWGLGYFGQPHILARFMAADSVKSIAKARRISMAWMILC 281

Query: 288 IAFLYTTAPAVAAFARVNMIDTINGPDMQGVTAAEAPTWYRNWESTGLVKWEDKNGDGRM 347
           +    T A      A  +    + GP ++                               
Sbjct: 282 LGG--TVAVGFFGIAYFSAHPEVAGPVIE------------------------------- 308

Query: 348 FYSGDARNEMTINNDIIVLASPEIAKLPNWVVALLAAGGLAAALSTAAGLLLVISTAISH 407
                       N + + +   +I   P WV  +L +  LAA +ST +  LLV S+A++ 
Sbjct: 309 ------------NPERVFIELAKILFNP-WVAGVLLSAILAAVMSTLSCQLLVCSSALTE 355

Query: 408 DLLKKGFKPDMTDKQELLAARIAAALAIVGAGYLGINPPGFVAQVVAFAFGLAAASFFPA 467
           D  K   +   +  + +   R    L  + A  L  NP   V  +V++A+    A+F P 
Sbjct: 356 DFYKAFLRKSASQLELVWVGRAMVLLVALIAIALAANPENRVLGLVSYAWAGFGAAFGPV 415

Query: 468 IILGIFYKKMNKEGAIIGMLAGITFTAAYIIYFKFINPAASVPANWW-----FGISPEGI 522
           +++ + +K M + GA+ G+L G   T     +F+ +     +P   +     + +S  G 
Sbjct: 416 VLISVVWKDMTRNGALAGILVG-AITVVVWKHFELLGLYEIIPGFIFASLAIYFVSKAGE 474

Query: 523 GTLGMCLNFVVA 534
            T GM   F  A
Sbjct: 475 PTRGMVERFEAA 486