Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 1e-32
 Identities = 76/222 (34%), Positives = 116/222 (52%), Gaps = 21/222 (9%)

Query: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGANG 66
           I+IADDH L   A+   +     G   + A S+D LL       + DL L+DL MPGA+G
Sbjct: 3   ILIADDHRLVIEAVKAKLSELEPGIEFVLAMSVDELLA--GATDDLDLALIDLNMPGADG 60

Query: 67  MSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNGE 126
            + +  +R  +P +P++V+S  E+P+++      G  GFIPK+     +++A+  VL G 
Sbjct: 61  QAHIDVIRQRHPAVPVMVLSGYEDPAIMRSALERGVLGFIPKAYSPDVMLSAVRLVLAGG 120

Query: 127 PYFPAHLLV---DGFVGNDLAEKVAA----------------LTPQQYKVLGMLSDGLLN 167
            Y P  +L     G V   + +   A                LT +Q +VL +LS G  N
Sbjct: 121 VYVPPMMLTALPPGIVAGVVPQAAEALSSRGGSQTLEHLRNVLTERQVEVLQLLSQGKPN 180

Query: 168 KQIAYELNVSEATIKAHMTAIFRKLGVKNRTQAVILLKEMSE 209
           K I   L +SE T+K H+ AIFR L V+NRT+AV+  + ++E
Sbjct: 181 KLIGRSLGISEGTVKIHLAAIFRALNVRNRTEAVVAAQALTE 222