Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., Transcriptional regulator, LuxR family from Variovorax sp. SCN45

 Score =  114 bits (286), Expect = 9e-31
 Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 8/196 (4%)

Query: 6   TIIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGAN 65
           +I + DDHPL R+A+   +       N++E + LD L   + +   P L  LDLK+P  N
Sbjct: 2   SIYVIDDHPLMRDAIVMVLRRLRPAENIVELERLDKLAGSVQQRGAPTLFCLDLKLPDTN 61

Query: 66  GMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNG 125
           G+SG+I ++  YP++PI V SA+    +       GA  +I KS+    L AAL  +L  
Sbjct: 62  GVSGVIAVKQVYPNVPIAVYSAAPAADMEDACIEAGADTYIEKSASSNELAAALRGLLMA 121

Query: 126 EPYFPAHLLVDGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSEATIKAHM 185
                     +       A     L+ +Q +++ ML   + N+ IA +L +SE T+K H+
Sbjct: 122 GS--------EDEADEPPAANSGKLSKRQTQLIAMLDKSMSNRDIATDLEISEHTVKVHL 173

Query: 186 TAIFRKLGVKNRTQAV 201
             +FR+LGVK+RTQA+
Sbjct: 174 WRLFRRLGVKSRTQAL 189