Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., no description from Variovorax sp. SCN45

 Score =  107 bits (268), Expect = 1e-28
 Identities = 71/206 (34%), Positives = 107/206 (51%), Gaps = 5/206 (2%)

Query: 6   TIIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGAN 65
           TI++ DDH +FR  L  ++  A     +  A +    L  L      D ++ D  +P   
Sbjct: 4   TILLIDDHAMFREGLRLALREAEPSMTIETASTGGEALQALQTLPVLDAVMTDYYLPDLG 63

Query: 66  GMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNG 125
           G + +  L      L ++V+SASE+P  +      GA GF+ KS+D R L+ AL +V+ G
Sbjct: 64  GAALVQQLHRRRGGLRVLVLSASEDPHDIETALEAGAQGFVHKSADSRQLLDALRRVMGG 123

Query: 126 EPYFPAHLLVDGF----VGNDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSEATI 181
           E     H+   G     V +   + ++ LT +Q +VL +L +GL N QIA  L  SE T+
Sbjct: 124 EQNV-VHMSPQGVSPLPVLSTPTDGLSRLTARQTEVLHLLCEGLRNAQIAQRLETSEKTV 182

Query: 182 KAHMTAIFRKLGVKNRTQAVILLKEM 207
           KAH++AIF  L V NRTQA I  + +
Sbjct: 183 KAHISAIFAALDVSNRTQATIAARRV 208