Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., Regulatory protein, LuxR:Response regulator receiver from Variovorax sp. SCN45

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 69/216 (31%), Positives = 112/216 (51%), Gaps = 14/216 (6%)

Query: 3   STYTIIIADDHPLFRNALFQSVHM--AISGANL--LEADSL-DALLTLLNKESEPDLLLL 57
           S   I++ DDH L R  +   V    A SGA++   EA ++ DAL+     ++   L+LL
Sbjct: 13  SPTAILVVDDHDLLRLGVCALVQAQAASSGASIEVFEAGNVADALVLYEAHQASIGLVLL 72

Query: 58  DLKMPGANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIA 117
           DL +P   G+SGL   R  +PD  IVV+S +   ++   V + GA  F+PKS+D++ +++
Sbjct: 73  DLALPDTRGLSGLADFRQRFPDARIVVLSGTGNSTLAQGVLALGAAAFLPKSADLKEVVS 132

Query: 118 ALNQVLNGEPYFP---------AHLLVDGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNK 168
            +      +P  P         A   + G+     A     LTP+Q +VL  + +G  NK
Sbjct: 133 FIRACGLLDPSAPGTTEPPPPTASKPLAGYAEFAHASAWQELTPRQMQVLQWVLEGKANK 192

Query: 169 QIAYELNVSEATIKAHMTAIFRKLGVKNRTQAVILL 204
           +IA   N+SE T+K H++ I    G+++R Q +  L
Sbjct: 193 EIAQLANLSEGTVKNHVSTILLLFGMRSRAQLISTL 228