Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., response regulator in two-component regulatory system with NarQ from Escherichia coli BL21

 Score = 96.7 bits (239), Expect = 3e-25
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 5   YTIIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGA 64
           + ++I DDHPL R  + Q + +      + EA    + + L N+  + D++LLDL M G 
Sbjct: 7   FQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANR-LDIDVILLDLNMKGM 65

Query: 65  NGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLN 124
           +G+  L  LR +     I++++ S+  S V  +   GA G++ K SD   L+ A+     
Sbjct: 66  SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125

Query: 125 GEPYFPAHL---LVDGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSEATI 181
           G   F   +   L +  +     +  + LT ++  VL  L+ GL NKQIA  LN+SE T+
Sbjct: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185

Query: 182 KAHMTAIFRKLGVKNRTQAVIL 203
           K H+  + RKL V++R  A IL
Sbjct: 186 KVHIRNLLRKLNVRSRVAATIL 207