Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., Putative HTH-type transcriptional regulator YhjB from Azospirillum sp. SherDot2

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 15/213 (7%)

Query: 4   TYTIIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMP- 62
           T   ++ D+ P+ R+    S+     G  +LEA SLD  L +  +  E  L+L D   P 
Sbjct: 18  TRIFLVVDEQPMVRHGFALSIGEICPGTRVLEAGSLDEALNVCRQTPELALVLYDPGPPR 77

Query: 63  ------GANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLI 116
                 G   ++GL  L+    ++PI++++ S+E + +      GA G++ K+S    L 
Sbjct: 78  VDGDDAGGGAIAGLRRLKEALGEVPILILTNSDEVADIVDSVRMGARGYVLKTSPPEVLE 137

Query: 117 AALNQVLNGEPYFPAH------LLVDGFVGNDLAEKVAALTPQQYKVLGMLSDGLLNKQI 170
            A++  L+G+ + P         L +G  GND  + +  LT +Q  V  +L  G  NK+I
Sbjct: 138 HAISLALSGDIFLPLPRAVLNGALAEGPRGND--DILDRLTDRQRDVFELLLAGHSNKEI 195

Query: 171 AYELNVSEATIKAHMTAIFRKLGVKNRTQAVIL 203
           A  L V E T+K H+ AI +KLGV+NRTQ  ++
Sbjct: 196 ARGLGVLEGTVKVHVRAIMQKLGVRNRTQVAVV 228