Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Transcriptional regulatory protein DegU from Azospirillum sp. SherDot2

 Score =  129 bits (324), Expect = 4e-35
 Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 20/221 (9%)

Query: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMPGANG 66
           ++IADDH LFR+ L + +    +     EA + D +  L +     DL+LLDL MPG  G
Sbjct: 3   VLIADDHLLFRDGLRRLLAQFDADMTFFEASTYDEVRALCDGTRPFDLILLDLGMPGWTG 62

Query: 67  MSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNGE 126
            S L  +    P   +VV+S SE+ S +     +GA G+IPKSS  + L+ AL  VL G 
Sbjct: 63  FSALGDIHVNLPKALLVVVSGSEKRSDLLAALENGAAGYIPKSSSAKVLLGALQLVLAGG 122

Query: 127 PYFPAHLL---------VDGFVGNDLAEKV-----------AALTPQQYKVLGMLSDGLL 166
            Y P   +           G+ G+   E +             LTP+Q  VL  L DG  
Sbjct: 123 IYLPEQAIRGADRVEQTHGGYGGHGSGEAMDDNAGMANANGDQLTPRQRDVLARLRDGKS 182

Query: 167 NKQIAYELNVSEATIKAHMTAIFRKLGVKNRTQAVILLKEM 207
           NKQIA+EL ++E T+K H+TAI R LGV+NRTQA +  + +
Sbjct: 183 NKQIAHELGLTEGTVKVHVTAILRHLGVRNRTQAALTAQSL 223