Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  172 bits (437), Expect = 3e-48
 Identities = 101/214 (47%), Positives = 136/214 (63%), Gaps = 13/214 (6%)

Query: 3   STYTIIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKESEPDLLLLDLKMP 62
           S   IIIADDHPLFR AL Q+V        ++EA   +A        ++ DL+LLDL MP
Sbjct: 2   SELVIIIADDHPLFRGALKQAVAGLDGQQTIIEAGDFEAARHAATTRNDADLMLLDLAMP 61

Query: 63  GANGMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQV 122
           G +G SGL+ LR+E+  LPIV++SA+++ + V +    GA GFI KSS +  +   +  V
Sbjct: 62  GVSGFSGLMALRAEFSSLPIVIVSATDDATTVRRSIELGASGFISKSSGIDDIRDGIRAV 121

Query: 123 LNGEPYFPAHLLVDGFVGN--------DLAEKVAALTPQQYKVLGMLSDGLLNKQIAYEL 174
           L G+ + P+     G  G         DL  ++  LTPQQ +VLGML++GLLNKQIAYEL
Sbjct: 122 LEGDVWIPS-----GHQGEKEQDPDVADLIGRLRTLTPQQSRVLGMLAEGLLNKQIAYEL 176

Query: 175 NVSEATIKAHMTAIFRKLGVKNRTQAVILLKEMS 208
           NVSEATIKAH++AI  KL V +RTQAVI L +++
Sbjct: 177 NVSEATIKAHVSAILLKLKVDSRTQAVIQLAKIN 210