Pairwise Alignments

Query, 435 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., anaerobic C4-dicarboxylate transporter DcuB from Escherichia coli ECRC62

 Score =  295 bits (754), Expect = 3e-84
 Identities = 167/442 (37%), Positives = 260/442 (58%), Gaps = 14/442 (3%)

Query: 4   VELAIVLLFIFIGARIGGIGIGLAGGAGVIALSLILGVPTKQAFIPVDVILIIMSVITAI 63
           ++L I+L+ +F GAR GGI +GL GG G++ L  +  +   +   PVDV+L+I++V+ A 
Sbjct: 5   IQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQPGKP--PVDVMLVIIAVVAAS 62

Query: 64  AAMQVAGGMDWLVQLAENFLRKHPERITFYAPIVTFLMTLMAGTGHTAFSTLPVIAEVAK 123
           A +Q +GG+D ++Q+AE  LR++P+ ++  AP VT  +T++ GTGH  ++ LP+I +VA 
Sbjct: 63  ATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTILCGTGHVVYTILPIIYDVAI 122

Query: 124 GQGVRPSRPLSIAVVASQIAITASPISAAVVAFAAML--VPFG---VDYLTLLAICIPTT 178
              +RP RP++ + + +Q+ I ASP+S AVV+  AML  V F    +++L LLAI IP+T
Sbjct: 123 KNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLGNVTFDGRHLEFLDLLAITIPST 182

Query: 179 FAACMVGAFVANFMGSELKDDPIYQERLA-----QGLIKLAGTQKREILPTAK-TATYIF 232
               +     + F G +L  D  +Q+ ++     + +     T   + LP +   A +IF
Sbjct: 183 LIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREYVYGDTATLLDKKLPKSNWLAMWIF 242

Query: 233 LTAIILVVCYAAAISNSIGLIENPALGRNEAIMTFMLAAAAGIVLLTKIDAAQIPAASTF 292
           L AI  VV    A S+         L     I  FML   A I++LTK + A I     F
Sbjct: 243 LGAIA-VVALLGADSDLRPSFGGKPLSMVLVIQMFMLLTGALIIILTKTNPASISKNEVF 301

Query: 293 RSGMTACVCVLGVAWLGSTFVNAHVDGIKEVAGTLLADYPWMLALVLFFASMLLYSQGAT 352
           RSGM A V V G+AW+  T   AH+  I+ V G ++ +YPW  A+VL   S  + SQ A 
Sbjct: 302 RSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLGEMVKEYPWAYAIVLLLVSKFVNSQAAA 361

Query: 353 TVALMPAALAIGVAPLTAVASFAAVSALFVLPTYPTLLAAVEMDDTGSTRIGSYVFNHPF 412
             A++P ALAIGV P   VAS  A    ++LPTYP+ LAA++ D +G+T IG +V NH F
Sbjct: 362 LAAIVPVALAIGVDPAYIVASAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHSF 421

Query: 413 FIPGVVTIASAVAFGFLFGSLF 434
            +PG++ ++ +  FG++F +++
Sbjct: 422 ILPGLIGVSVSCVFGWIFAAMY 443