Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score = 99.8 bits (247), Expect = 8e-26
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 27/323 (8%)

Query: 5   ADSARLLSDQDLQGYVSRILDVIPL--PIIISKSSVLGQGE---REHLHFNKAFVKELGY 59
           A +A LL+    QG V R+ +   L   +++S ++VL   +   R  L+ + A+ +  G 
Sbjct: 20  AAAATLLALVHAQGEVERLSEREQLLSSMLVSVNAVLWAMDWETRRVLYVSPAYERVFGR 79

Query: 60  TMAQI-PNIETWFERAYPQ-IDYRQEIIAQWQKTVDEARAQGEDVAHMPALIMCADGVQR 117
           +   +  +   W    +P+ +DY +  +A+  +     R   ED  +    I+ ADG  R
Sbjct: 80  SAGLLLADHREWRNSIHPEDLDYAEHSLARVLE-----RGAVEDREYR---IITADGQIR 131

Query: 118 WFS----VSAQIEPSCRDDLHIITF-RNIHDYKISLAEAERQSQIDPLTQLKNRRGFF-- 170
           W S    ++ ++EP   + L ++    +I + K    E  R +  D LTQ  NRR FF  
Sbjct: 132 WLSDKCYINQRVEPG--EPLIVVGMAEDITEKKQMELELHRLATTDVLTQSSNRRHFFEC 189

Query: 171 ---TWSEPIAPETLLGLIIFDIDHFKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVR 227
               +    A    L  ++ DID FK +ND+YGH  GD VLR+IA      L       R
Sbjct: 190 ANLAFDTACAKGEPLAFLLLDIDDFKDVNDSYGHLEGDQVLRRIAESGRGVLRRGDLFGR 249

Query: 228 WGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWD 287
            GGEEF            + +AE +   ++  +  ++GQ  ++T+S G           D
Sbjct: 250 IGGEEFAAVLPGCAPEMALQVAERLGREIQELSFSYEGQAFSVTISQGLASLTEADSTLD 309

Query: 288 NLLHTADQALLSAKRLGRNRVIA 310
           +L   AD A+  AKRLG+NRV+A
Sbjct: 310 SLFARADAAMYEAKRLGKNRVVA 332