Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 8/167 (4%)

Query: 149 AEAERQSQIDPLTQLKNRRGFFTWSEPIA----PETL-LGLIIFDIDHFKQINDTYGHPA 203
           AE +RQ++ D LT L NR G     +       P+T  LG+++ DIDHFK +ND +GH  
Sbjct: 407 AELDRQARFDALTGLLNRHGMEERLQQALAVSNPDTAPLGIVMIDIDHFKSVNDRFGHAT 466

Query: 204 GDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMW 263
           GD VL+ +AGL++  L       R GGEEF++     + A  +  A ++   V    +  
Sbjct: 467 GDLVLKAVAGLMKSRLRKSDIAARLGGEEFVLMLPGANAAEAMQTATDLVRLVGEAFIDP 526

Query: 264 QGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVIA 310
            G    +T+S G +       +  + L  AD+AL +AK LGRNR +A
Sbjct: 527 VGH---ITISCGVSQMLREDDSVASALRRADKALYAAKSLGRNRAMA 570