Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., GAF domain/GGDEF domain protein from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 142 HDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEP---IAPET--LLGLIIFDIDHFKQIN 196
           H  ++ +   +R++ +DPLTQL NR     +      +A E    LG +  D+D FK +N
Sbjct: 168 HALRVEMDRGQRRALLDPLTQLWNRGALAAFQNRELRLAEERGLQLGAVYADLDRFKSVN 227

Query: 197 DTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYV 256
           D +GH AGD VL + A  L   L P    VR GGEEF+      D   +  +AE +R  +
Sbjct: 228 DEHGHDAGDKVLCECARRLRATLRPDDLLVRQGGEEFVALLRVKDSQELAQIAERLRQSI 287

Query: 257 ESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVI 309
            S   +  G    +T+S GC +        D+ +  AD  L +AK  GR++V+
Sbjct: 288 GSAPFLLPGGPRKMTMSIGCAL-LTQGEQIDDAIKRADGGLYAAKHGGRDQVV 339