Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 64/168 (38%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 149 AEAERQSQIDPLTQLKNRRGFFTWSEPIAPETL-----LGLIIFDIDHFKQINDTYGHPA 203
           A  E  + +D LT L NRR F   +     E       L  ++ D+DHFK +ND +GH A
Sbjct: 323 ASTEALATLDSLTGLYNRRSFDLLAAQALREARRDSSPLVALLIDLDHFKALNDNHGHLA 382

Query: 204 GDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMW 263
           GD VLRQ A +L+ +L       RWGGEEF+V     +    I +AE IR   E  T  +
Sbjct: 383 GDEVLRQFANVLQGSLRQSDILCRWGGEEFIVLLREAEGRQAIEVAEKIRRRTEQLTFSY 442

Query: 264 QGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVIAD 311
             Q + LT S G +           LL  AD+AL  AK+ GRNRV ++
Sbjct: 443 DNQPLRLTTSIGLS-SLQPGDTLHALLTRADRALYRAKQAGRNRVCSE 489