Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., sensor domain-containing diguanylate cyclase from Pseudomonas fluorescens SBW25

 Score =  101 bits (252), Expect = 2e-26
 Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 25/322 (7%)

Query: 5   ADSARLLSDQDLQGYVSRILDVIPL--PIIISKSSVLGQGE---REHLHFNKAFVKELGY 59
           A +A LL+    QG V R+ +   L   +++S ++VL   +   R  L+ + A+ +  G 
Sbjct: 20  AAAATLLALVHAQGEVERLSEREQLLSSMLVSVNAVLWAIDWETRRVLYVSPAYERVFGR 79

Query: 60  TMAQI-PNIETWFERAYPQ-IDYRQEIIAQWQKTVDEARAQGEDVAHMPALIMCADGVQR 117
           + + +  +   W    +P+ +DY +  +A   + +++   +  +       I+ A+G  R
Sbjct: 80  SASLLLADHREWRNSIHPEDLDYAEHSLA---RVLEQGAVEDREYR-----IITANGQIR 131

Query: 118 WFS----VSAQIEPSCRDDLHIITFRNIHDYKISLAEAERQSQIDPLTQLKNRRGFF--- 170
           W S    ++ Q+EP     + +    +I + K    E  R +  D LTQ  NRR FF   
Sbjct: 132 WLSDKCYINQQVEPG-EPVIVVGMAEDITEKKQLELELHRLATTDVLTQSSNRRHFFECA 190

Query: 171 --TWSEPIAPETLLGLIIFDIDHFKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRW 228
              +    A    L  ++ DID FK +NDTYGH  GD VLR+IA      L       R 
Sbjct: 191 NQAFDTACAQGAPLAFLLLDIDDFKDVNDTYGHLEGDQVLRRIAESGRGVLRRGDLFGRI 250

Query: 229 GGEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWDN 288
           GGEEF            + +AE +   +++ +  ++GQ  ++T+S G    +      D+
Sbjct: 251 GGEEFAAVLPGCAPEMALQVAERLGKEIQALSFSYEGQAFSVTISQGLANLSEADSTLDS 310

Query: 289 LLHTADQALLSAKRLGRNRVIA 310
           L   AD A+  AKRLG+NRVIA
Sbjct: 311 LFARADAAMYEAKRLGKNRVIA 332