Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., predicted diguanylate cyclase (NCBI) from Escherichia coli BW25113

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 13/209 (6%)

Query: 108 LIMCADGVQRWFSVSAQIEPSCRDDLHIITFRNIHDYKISLAEAERQSQIDPLTQLKNRR 167
           L M    V  W+ +S  IE   +  + +I   +I     +L   +  +  DPLT + NR 
Sbjct: 239 LFMSRYSVSTWY-ISRTIEVVSKLTVMVIFMCHIFS---ALRVTKNIAHRDPLTNIFNRN 294

Query: 168 GFF---TWSEPIAPETLLGLIIFDIDHFKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSC 224
            FF   T     A +T   ++I DIDHFK++NDT+GHP GD V++ +  ++ +++ P   
Sbjct: 295 YFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDL 354

Query: 225 CVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTLSAGCTMGAMMSH 284
             R GGEEF V     D      LAE IR+ VE   L     + A+      ++GA+++ 
Sbjct: 355 LARVGGEEFGVLLTDIDTERAKALAERIRENVE--RLTGDNPEYAIPQKVTISIGAVVTQ 412

Query: 285 ----NWDNLLHTADQALLSAKRLGRNRVI 309
               N + +   AD AL  AK  GRN+V+
Sbjct: 413 ENALNPNEIYRLADNALYEAKETGRNKVV 441