Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator from Escherichia coli BL21

 Score = 90.5 bits (223), Expect = 7e-23
 Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 9/159 (5%)

Query: 157 IDPLTQLKNRRGFFT-WSEPIAPE----TLLGLIIFDIDHFKQINDTYGHPAGDYVLRQI 211
           +D LT+L NRR   T +   IA      T L ++I D+D FK+INDT+GH  GD +LR++
Sbjct: 297 MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKV 356

Query: 212 AGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTL-MWQGQQIAL 270
           +     N+       R+GG+EF++          +  AE IR  VE   L    G+ IAL
Sbjct: 357 SQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIAL 416

Query: 271 TLSAGCTMGAMMSH-NWDNLLHTADQALLSAKRLGRNRV 308
           +LS G  M     H +++ L+  AD+AL  AKR GRNRV
Sbjct: 417 SLSIGAAM--FNGHPDYERLIQIADEALYIAKRRGRNRV 453