Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 66/172 (38%), Positives = 87/172 (50%), Gaps = 11/172 (6%)

Query: 149 AEAERQSQIDPLTQLKNRRGFFTWSEPIAP-----ETLLGLIIFDIDHFKQINDTYGHPA 203
           AE  R S  DPLT + NRR F    E +       E  L +II D+D FK  ND YGHP 
Sbjct: 356 AELIRLSLSDPLTNIPNRRAFEMEMEKVIAMSKRYEWPLTVIILDVDSFKLYNDNYGHPK 415

Query: 204 GDYVLRQIA-GLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLM 262
           GD  L+ +A GL E        C R+GGEEF+      D       AE IRD +ES  + 
Sbjct: 416 GDECLKAVAIGLNEVITRNTDFCARYGGEEFVAILPNIDEKGAKVKAEEIRDAIESLGIE 475

Query: 263 WQGQQIALTLSAG---CTMGAMMSHNW--DNLLHTADQALLSAKRLGRNRVI 309
                ++  ++A     T+  +  HNW   ++L+TAD+AL  AK  GRNR +
Sbjct: 476 HSKSTVSPVITASLGVATVNFVNHHNWTLTSILNTADRALYDAKTGGRNRCV 527