Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 63/161 (39%), Positives = 81/161 (50%), Gaps = 6/161 (3%)

Query: 155 SQIDPLTQLKNRRGFFTWSEPIAPET----LLGLIIFDIDHFKQINDTYGHPAGDYVLRQ 210
           S+ D LT + NRR        I         LG++I DIDHFK IND YGH  GD  L++
Sbjct: 411 SETDALTGVFNRRALEKSVRAILSGDEDYQSLGVMIIDIDHFKSINDRYGHAMGDLALQK 470

Query: 211 IAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIAL 270
            A LL+  L       R+GGEEF+V  +    A     A+ +R  +E  T   Q   ++L
Sbjct: 471 TASLLKGALRKTDILARYGGEEFVVVLQDVSHATATATADRLRRLIEVQTFDEQ-TGLSL 529

Query: 271 TLSAGCT-MGAMMSHNWDNLLHTADQALLSAKRLGRNRVIA 310
           T S G     A   ++WD L+  AD  L  AKR GRNRV A
Sbjct: 530 TASFGVVWQEARAINSWDELIAIADDRLYEAKRAGRNRVWA 570